Archeologists Find New Tombs In Egypt

Egypt’s Supreme Council of Antiquities announced Sunday that archeologists have discovered 57 ancient Egyptian tombs, most of which contain an ornamental painted wooden sarcophagus with a mummy inside.

Twelve of the tombs were found to belong to the 18th dynasty which ruled Egypt during the second millennium B.C. Some of the tombs date as far back as 2750 B.C., according to the council.

The finding brings to light the ancient Egyptian religions, the council said.

Egypt’s archaeology chief, Zahi Hawass, said the mummies that date to the 18th dynasty are covered in linen decorated with religious texts from the Book of the Dead and scenes of ancient Egyptian deities.

Some of the tombs are decorated with religious texts that ancient Egyptians believed would help the deceased cross over to the underworld, said Abdel Rahman El-Aydi, head of the mission that made the discovery.

El-Aydi said one of the oldest tombs is almost completely intact, with all of its funerary equipment and a wooden sarcophagus containing a mummy wrapped in linen.

In 31 of the tombs, dating back to around 2030 – 1840 B.C., archeologists found scenes of different ancient Egyptian deities, such as the falcon-headed Horus decorated on the tombs.

The tombs were unearthed at Lahun, in Fayoum, 70 miles south of Cairo, said the council. 53 stone tombs were discovered last year in the same area.

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Rare Black Rhinos Moved To The Serengeti

32 critically endangered East African black rhinos are set to be flown from South Africa back to their habitat in Tanzania’s Serengeti Park, and so far 5 have made it as of Friday.

The rhinos had been bred from a group that was rescued from the Serengeti in the 1960s and relocated to South Africa to prevent extinction of the species by poachers.

Widespread poaching in the Serengeti in the 60s and 70s saw the population of the black rhinos in Tanzania dwindle from over 1,000 to just 70. Seven were relocated to South Africa in the early 60s.

“This event is a stark warning of what went wrong in the past,” Tanzanian President Jakaya Kikwete said at a ceremony for the arrival of the A C-130 Hercules aircraft at the remote Seronera airstrip, deep in the Serengeti.

“The government is fully committed to the protection of wildlife in general and rhinos in particular,” he said.

The relocation of the rhinos was part of a plan by African governments to protect the “big five” mammals — lions, elephants, leopards, buffalo, and the black rhinos — that make up one of the continent’s main tourist attractions.

“We have trained a special force that will take care of the animals. They are now operating. They are out there in the field cleaning the area (of poachers),” said Dr Simon Nduma, director of the Tanzanian Research Institute.

Conservation experts said the extra protection for the rhinos will help the other species in the park.

In the past few years, both Tanzania and Kenya have suffered a sharp rise in poaching of elephants and rhinos. Kenya lost at least six rhinos last year, according to experts. But, officials say that conservation efforts are becoming more sophisticated and cross-border.

“Conservation is without boundaries, animals don’t carry passports and we believe we are almost in unison in … what we want to achieve in Africa,” said South African National Parks Chief Operating Officer David Mabunda.

The 32 black rhinos being reintroduced to Tanzania are part of a 50-strong herd bred from the original seven that were rescued in the 60s.

Physicists Describe Melting Of Colloidal Crystal Films

Physicists from the University of Pennsylvania and Hong Kong University of Science and Technology have reported an elegant experimental study of the melting behaviors of thin crystalline films, uncovering a variety of interesting differences between thick films of greater than four layers and thinner or single-layer films.

Put simply, thin crystalline films melt differently depending on thickness.  The scientists made crystalline films from closely packed micron size gel beads.  Small changes in temperature caused the beads to change size and the films to melt.  The findings, published in the current edition of Physical Review Letters, are relevant to technologies that require thin film adhesion as well as lubrication technologies.

Yilong Han of Hong Kong school and Arjun Yodh of Penn joined forces to create thin crystalline films confined between two glass walls.  The films were composed of temperature-sensitive, diameter-tunable microgel spheres with short-ranged repulsive interactions.  Using digital video microscopy, the researchers were able for the first time to observe their behavior during melting with single particle resolution.

Among many observations, very thin solid films were found to abruptly melt into the liquid phase while thicker films behaved more like conventional solids exhibiting traditional liquid-solid coexistence.  A critical thickness of four layers marked the crossover from one behavior to the other.

The study also explored melting differences between single and polycrystalline thin films.   In general, melting in thick polycrystalline films began from grain boundaries while thin solid films of two to four layers melt into the liquid phase in one step from both grain boundaries and from within crystalline domains.  Monolayers melt in two steps with the well known middle hexatic phase.

“The melting behavior of thin solid films presents interesting new questions and challenges for both theory and experiment,” Han said, “because melting behaviors are not quite bulk like and are also different from what we know about two-dimensional systems.”

“To date,” Yodh said, “only a few experiments in atomic and molecular thin films have critically explored these issues because it is difficult to visualize and track the atoms.  Colloidal microgel particle films, on the other hand, offer a new experimental means to examine these basic questions.”        

“Scientists have studied melting for a long time,” said Thomas Rieker, program director at the National Science Foundation.  “This experiment links everyday experience with the melting of materials such as ice, the coexistence of liquid and solid phases, with the predictions in the 1970s of Kosterlitz, Thouless, Halpern, Nelson of how a monolayer of atoms on a surface melts.  What is really interesting is how short range the effects of a surface are.”        

The study was conducted by Han, Y. Peng and Z. Wang of Hong Kong University of Science and Technology, Yodh from the Department of Physics and Astronomy and A. M. Alsayed from the Penn physics and astronomy department and Rhodia Inc.

The work was supported by funding from the Research Grants Council of Hong Kong, the National Science Foundation, the NSF Materials Research Science and Engineering Center at Penn, the National Aeronautics and Space Administration and Rhodia.

Image Caption:  Fluorescently labeled microscopic beads can simulate melting, as shown by this superposition of several frames of video. With more than four layers of beads, the melting shows “rivers” of liquid forming within crystalline regions, whereas no such coexistence exists when there are fewer than five layers. 

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Smoking Cessation Treatments Work For People With Severe Mental Illness

In a study published May 20 in the journal Addiction, researchers have determined that treatment for smoking dependence is as effective among people with severe mental illnesses as it is for the general population. Importantly, they also found that offering such treatments does not appear to cause deterioration in mental health.

This is good news: people with severe mental illnesses (SMI) such as schizophrenia have some of the worst physical health of any section of the population. They are two to three times more likely to smoke, and smoking-related illnesses contribute significantly to their high sickness and death rates. Mortality rates for those with SMI are three times that of the rest of the population.

Although treatment for smoking dependence would improve the physical health of people with SMI, the medical community has traditionally ignored health promotion and worried that such treatments would worsen people’s mental states.

The authors brought together the most rigorous evidence on smoking cessation treatment among people with SMI. They were able to determine the effectiveness of smoking cessation treatment and chart any predictable adverse effects. In general, people with SMI responded well to pharmaceutical and behavioral treatments, which doubled their chance of quitting.

Because most of the studies focused on people with well controlled psychiatric conditions, it was not possible to state how well people with acute mental illness (such as those who have experienced recent hospitalization) would respond to smoking cessation treatment.

Professor Simon Gilbody from the University of York & Hull York Medical School, who co-authored the review, commented that “schizophrenia is a devastating condition which causes people to die 25 years earlier than the rest of the population. This is a huge health inequality, and it is largely due to smoking-related illness rather than schizophrenia itself.”

Dr Lindsay Banham, who led the review, added “what this review suggests is that quit-smoking treatments like nicotine replacement therapy may work just as well for people with disorders like schizophrenia. Smoking by those with SMI has largely been ignored and people with schizophrenia are not consistently offered treatment or services. We found evidence that smoking cessation treatments are effective and safe. We hope our research leads to better services for this neglected population.”

Professor Gilbody concluded, “Despite huge expansion in smoking cessation services in recent years, people with severe mental illness have been left behind. The challenges for health services are to ensure people with schizophrenia are offered these treatments, and that services reflect the needs of this population.”

Reference: Banham L. and Gilbody S. Smoking cessation in severe mental illness: What works? Addiction 2010; 105: doi:10.1111/j.1360-0443.2010.02946.x

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Weight Watchers Meetings Help Reduce Risk For Type 2 Diabetes

Group program has powerful impact on disease risk, at a fraction of the cost

The 57 million Americans currently living with “pre-diabetes” could benefit from a group weight loss program, like Weight Watchers, according to a new study published in this month’s American Journal of Lifestyle Medicine. Researchers found that after a 6-month Weight Watchers group program, overweight or obese adults who attended at least two thirds of the weekly sessions, not only lost weight, but also significantly reduced fasting glucose and insulin levels ““ important indicators of diabetes risk.

Sixty-one overweight or obese men and women participated in a 6-month Weight Watchers study that included education on a lower calorie diet (a food plan), exercise (an activity plan) and weekly group support sessions. Not surprisingly, the researchers found that participants who attended the most sessions, had the most success, reinforcing the importance of group support in lifestyle change. In fact, those who attended at least twenty of the twenty-four sessions, lost an average of 14 pounds and had the most dramatic change in glucose and insulin levels associated with diabetes risk, compared to those who attended few sessions.

“We know that previous research programs have successfully reduced diabetes risk using intensive lifestyle treatment,” said Kathleen Melanson, PhD, RD, LD study co-author. “But what we didn’t know is that a program that costs appreciably much less than specially-designed diabetes prevention programs would have a profound impact on the same risk factors for type 2 diabetes. These findings could have important public health potential.”

Type 2 diabetes is closely tied to obesity ““ and both conditions have increased dramatically over the past 20 years. There are now more than 23 million Americans living with type 2 diabetes in this country. Combined with those who have pre-diabetes, a condition that will likely lead to diabetes without any intervention, the toll on our healthcare system is extensive. According to the Centers for Disease Control, the total cost of treatment of diabetes in the United States exceeds $200 billion, making treatment and prevention a priority for healthcare experts. Yet, the gold standard study on diabetes prevention, the Diabetes Prevention Program Trial (DPP), found that individual lifestyle interventions could reduce the risk of developing diabetes by more than fifty percent.

“Individual lifestyle intervention is obviously successful in reducing the risk for diabetes, but it comes at a high cost, and may not be realistic for all Americans,” said Karen Miller-Kovach, RD, chief scientific officer for Weight Watchers International. “We’re encouraged that the Weight Watchers program, already successful for helping millions of Americans lose weight, could also have the potential to reduce disease risk and even help reduce healthcare burden, for as little as about forty dollars per month, per person.”

According to the American Diabetes Association, “structured programs emphasizing lifestyle changes including moderate weight loss (7% body weight) and regular physical activity (150 min/week), with dietary strategies including reduced calories and reduced intake of dietary fat, can reduce the risk for developing diabetes.”

Source: Melanson KJ, Lowndes J. Type 2 diabetes risk reduction in overweight and obese adults through multidisciplinary group sessions: effects of meeting attendance. American Journal of Lifestyle Medicine. 2010;4:275-281.

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Public Pools – Swim At Your Own Risk!

Before you decide to go for a dip in a public swimming pool this summer, you should know what you may be diving into.

A new government report shows that one in eight public swimming pools were shut down in 2008 due to dirty water or other issues, such as missing safety equipment.

Kiddy pools were the worst as far as germs go; improper chlorination and fecal matter were the top offenders.

The report is based on more than 120,000 public swimming pool inspections in 2008, which include hotel pools and those at amusement parks. The report, released May 20, is the largest scale study for this topic ever done by the Centers for Disease Control and Prevention.

Pools are to blame for as many as 15 to 20 outbreaks from stomach bugs, according to the CDC. Studies suggest that 25 percent of those outbreaks are caused by bacteria, viruses or parasites that should have been killed if proper pool treatments and chlorination were used correctly.

Fecal matter is a common factor in many public pools, especially in kiddy pools and fountains where children play. Urine is also a big problem. Urine contains nitrogen that eats up chlorine in pool water, depleting the overall supply. Sweat and suntan lotion have the same effects.

According to a survey of 1,000 Americans done last year for the chemical industry group Water Quality and Health Council, one in five adults admitted they have peed in the pool before.

Reports of illnesses related to pools have been increasing through the last decade, but it isn’t clear if its due to worsening conditions or a lack of awareness, said Michele Hlavsa, chief of the CDC’s swimming pool program.

“We definitely need to focus on improving pool operations,” she told The Associated Press.

Before you go swimming in any public pool, the CDC suggests buying test kits available at most hardware stores and checking the water at public facilities. Health officials also say people who have had dysentery shouldn’t swim, and everyone should avoid swallowing pool water.

The new study is published in a CDC publication, Morbidity and Mortality Weekly Report.

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Depressed Chronic Kidney Disease Patients More Likely To Face Complications

Patients with chronic kidney disease who have been diagnosed with depression are twice as likely to be hospitalized, progress to long-term dialysis treatments or die within a year as those who are not depressed, UT Southwestern Medical Center researchers have found.

In the study, published in the May 19 issue of the Journal of the American Medical Association, researchers monitored for one year 267 patients with chronic kidney disease ““ 56 of them with a diagnosis of a current major depressive episode, referred to here as depression, based on the Diagnostic and Statistical Manual of Mental Disorders 4th edition (DSM-IV).

Nearly 61 percent of patients with depression compared to 44 percent without depression either died, progressed to long-term dialysis, or were hospitalized within a year of observation; 55 percent of depressed patients were hospitalized compared to 40 percent of patients who were not depressed; 27 percent of depressed patients needed to start regular dialysis treatments compared to 11 percent without depression; and 9 percent of depressed individuals died compared to 6 percent without depression.

“Chronic kidney disease patients with depression have poorer health outcomes than those without depression, even after adjusting for other factors that determine poor outcomes in these patients, such as other medical diseases, anemia and low albumin levels,” said Dr. Susan Hedayati, assistant professor of internal medicine at UT Southwestern, staff nephrologist at the Dallas VA Medical Center and lead author of the study. “Clinicians should consider screening chronic kidney disease patients for depression, especially since depression is also associated with poor quality of life.”

Twenty-six million people in America have chronic kidney disease and millions more are at an increased risk, according to the National Kidney Foundation. If treatment does not begin early, the condition progresses to end-stage renal disease. At that point, a patient’s kidneys have failed to the point where dialysis ““ a filtering of toxic chemicals in the blood and removal of fluid to help control blood pressure ““ or a kidney transplant is needed.

In 2007 an estimated $24 billion, about 6 percent of the entire Medicare budget, was spent on dialysis-related health care in patients with chronic kidney disease, according to the U.S. Renal Data System 2009 Annual Report.

This JAMA study is the first to look at outcomes as they relate to an association between chronic kidney disease and depression in patients prior to starting regular dialysis. In previous reports, Dr. Hedayati has found that one in five chronic kidney disease patients is depressed before beginning long-term dialysis therapy and that patients already on dialysis who have been diagnosed with depression are nearly twice as likely to be hospitalized or die within a year than those who are not depressed.

For the current study from May 2005 to November 2006, researchers invited patients at the Dallas VA Medical Center who were visiting the clinic for chronic kidney disease appointments to join the study. Patients who agreed to participate then underwent a structured clinical interview to determine if they had a current major depressive episode, based on the DSM-IV definition which is considered the gold-standard in evaluating depression.

Fifty-six patients were found to be depressed. The mean age of patients was about 65; two were women; and nearly 56 percent were white. All patients were veterans.

The association between chronic kidney disease, depression and poorer health outcomes held after adjusting for age, race and other current medical conditions.

“Our results support the need for well-designed clinical trials to investigate if antidepressant treatment is efficacious and safe in this vulnerable population. Patients with advanced kidney disease have been previously excluded from larger randomized trials of antidepressant medication treatment,” said Dr. Hedayati, who is now conducting the Chronic Kidney Disease Antidepressant Sertraline Trial (CAST) to determine whether antidepressant medication would be tolerated in kidney-disease patients and whether such treatments can improve depression and quality of life.

Other UT Southwestern researchers participating in this study were Dr. Abu Minhajuddin, assistant professor of clinical sciences; Dr. Masoud Afshar, a postdoctoral fellow in nephrology; Dr. Robert Toto, professor of internal medicine and clinical sciences; and Dr. Madhukar Trivedi, professor of psychiatry.

The study was supported by UT Southwestern’s George M. O’Brien Kidney Research Core Center, the National Institutes of Health and the Department of Veterans Affairs.

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Scientists Develop ‘Artificial Life’

U.S. researchers have developed the first bacteria cell controlled by a synthetic genome.

“This is the first synthetic cell that’s been made,” lead researcher Craig Venter told AFP News.

“We call it synthetic because the cell is totally derived from a synthetic chromosome, made with four bottles of chemicals on a chemical synthesizer, starting with information in a computer.”

The researchers said it now hopes to use the method it has developed “to probe the basic machinery of life and to engineer bacteria specially designed to solve environmental or energy problems.”

The study carried out by the J. Craig Venter Institute said the method could be used to design bacteria specifically to help produce biofuels or to clean up environmental hazards. 

“This becomes a very powerful tool for trying to design what we want biology to do. We have a wide range of applications (in mind),” Venter, co-author of the first sequencing of the human genome in 2000, told AFP.

The team synthesized the 1.08 million base pair genome of the bacterium Mycoplasma mycoides, created from four bottles of chemicals that make up the components of DNA.

They also added DNA sequences to “watermark” the genome to distinguish it from a natural one, in an attempt to overcome any controversy about the possibility of creating life from scratch.

They also imprinted the names of 46 scientists on the genome along with its own website address. 

“We do start with a living cell which we transform,” Venter told a later press conference, adding the cell had now gone through a “million steps of replication” and was now frozen in a freezer.

“This is an important step we think, both scientifically and philosophically. It’s certainly changed my views of the definitions of life and how life works,” he added in a statement.

He said the team had engaged in discussions about the ethical implications for their work.

In 2008, Venter’s team announced that it had chemically synthesized a bacterial genome, but it was not able to activate the genome in the cell during that time.

The team booted up the synthetic genome to create the first cell controlled by a synthetic genome.

Potential applications include producing algae to clean up carbon dioxide.

Researchers also hope to work on techniques that would help speed up the production of vaccines and to make new food ingredients and chemical substances.

“The ability to routinely write the software of life will usher in a new era in science, and with it, new products and applications such as advanced biofuels, clean water technology, and new vaccines and medicines,” the institute said on its website.

“Continued and intensive review and dialogue with all areas of society, from Congress to bioethicists to laypeople, is necessary for this field to prosper.”

Image Caption: Negatively stained transmission electron micrographs of dividing M. mycoides JCVI-syn1. Freshly fixed cells were stained using 1% uranyl acetate on pure carbon substrate visualized using JEOL 1200EX transmission electron microscope at 80 keV. Electron micrographs were provided by Tom Deerinck and Mark Ellisman of the National Center for Microscopy and Imaging Research at the University of California at San Diego.

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Low-cost, Ultra-fast DNA Sequencing Brings Diagnostic Use Closer

Boston University biomedical engineers develop new nanopore method for DNA sequencing

Sequencing DNA could get a lot faster and cheaper ““ and thus closer to routine use in clinical diagnostics ““ thanks to a new method developed by a research team based at Boston University. The team has demonstrated the first use of solid state nanopores “” tiny holes in silicon chips that detect DNA molecules as they pass through the pore “” to read the identity of the four nucleotides that encode each DNA molecule. In addition, the researchers have shown the viability of a novel, more efficient method to detect single DNA molecules in nanopores.

“We have employed, for the first time, an optically-based method for DNA sequence readout combined with the nanopore system,” said Boston University biomedical engineer Amit Meller, who collaborated with other researchers at Boston University, and at the University of Massachusetts Medical School in Worcester. “This allows us to probe multiple pores simultaneously using a single fast digital camera. Thus our method can be scaled up vastly, allowing us to obtain unprecedented DNA sequencing throughput.”

The research is detailed in Nano Letters. The National Institutes of Health are currently considering a four-year grant application to further advance Meller’s nanopore sequencing project.

This low-cost, ultra-fast DNA sequencing could revolutionize both healthcare and biomedical research, and lead to major advances in drug development, preventative medicine and personalized medicine. By gaining access to the entire sequence of a patient’s genome, a physician could determine the probability of that patient developing a specific genetic disease.

The team’s findings show that nanopores, which can analyze extremely long DNA molecules with superior precision, are uniquely positioned to compete with current, third-generation DNA sequencing methods for cost, speed and accuracy. Unlike those approaches, the new nanopore method does not rely on enzymes whose activity limits the rate at which DNA sequences can be read.

“This puts us in the unique advantageous position of being able to claim that our sequencing method is as fast as the rapidly evolving photographic technologies,” said Meller. “We currently have the capability of reading out about 200 bases per second, which is already much faster than other commercial third-generation methods. This is only the starting point for us, and we expect to increase this rate by up to a factor of four in the next year.” Licensing intellectual property from Boston University and Harvard University, Meller and his collaborators recently founded NobleGen Biosciences to develop and commercialize nanopore sequencing based on the new method.

“I believe that it will take three to five years to bring cheap DNA sequencing to the medical marketplace, assuming an aggressive research and development program is in place,” said Meller.

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Musk Turtles Breathe Underwater Through Their Tongues

One type of turtle possesses an extraordinary organ that lets the reptile breathe underwater and stay submerged for many months.

Scientists have discovered that the common musk turtle has a tiny tongue lined with specialized buds. 

The turtles use their tongues to exchange oxygen, solving a mystery of how these reptiles can remain submerged for so long.

The findings were reported in the journal The Anatomical Record.

“I was very surprised, I really didn’t expect that,” zoologist Egon Heiss, who is studying for his PhD at the University of Vienna in Austria, told BBC News.

Heiss and colleagues made the discovery while studying the feeding habits of the common musk turtle, which is a freshwater species that inhabits lakes and rivers in southern Canada and the eastern U.S.

Adults spend most of their lives underwater, but juveniles occasionally come onto land in order to find food.

The researchers noticed that when the animals found food, they could only eat it after dragging it back into the water.

Out of land the turtles struggled to swallow their prey.

The turtle has a weak and tiny tongue covered with and surrounded by specialized bud-like cells called papillae.

Further tests showed that the turtle uses these cells around its tongue to breathe.  It draws in oxygen from the water that passes over them.

“We knew that an organ for aquatic respiration must be present somewhere but finally discovered it accidentally,” Heiss told BBC News.

Some turtles cannot breathe underwater at all.

For example, all marine turtles must come to the surface at least every few hours for a breath of air.

Some freshwater turtles cannot breathe underwater, while others can do so through their skin.

Other species cope by using specialized cavities in their rear known as cloacal bursae, which draws in water and removes oxygen.

These turtles, which are found in Australia, often need to spend long periods of time underwater, where they hibernate, remaining asleep and still, not feeding and slowing their metabolic rates.

“Musk turtles, however, lack cloacal bursae and their skin is relatively thick and lacks a well developed capillary network,” Heiss told the BBC.

It still remains a mystery how these turtles can spend months underwater without coming to the surface, as they cannot take in enough oxygen through their skin.

“We found the large papillae in the throat and were immediately fascinated,” Heiss said.

He and his colleagues said the musk turtle’s tongue is likely to be an ancient trait.

Turtles are among the longest surviving group of higher land vertebrates.  They are estimated to have existed for 220 million years.

“I truly believe there’s still a lot to discover,” he continued.

“This study shows how plastic adaptations to certain environmental circumstances can be in turtles.”

Image Courtesy Suzanne L. Collins, CNAH

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Cystic Fibrosis Is Not Just Children

Patients Over 40 Once Unheard-of Now a Growing Segment of the Population

An emerging population of middle-aged cystic fibrosis patients contains significantly more females and includes a large proportion of patients who lived for decades without a diagnosis or specialized care, according to research published by researchers at National Jewish Health. The comprehensive analysis of this over-40 cohort, published online May 20 in the American Journal of Respiratory and Critical Care, may help guide future treatment of cystic fibrosis as survival past 40 becomes increasingly common.

“As both care and diagnosis have improved, cystic fibrosis has been transformed from a uniformly fatal childhood disease to a condition where survival to middle age and older is possible,” said National Jewish Health pulmonologist and lead author Jerry Nick, MD. “We were surprised to discover that the majority of patients diagnosed as adults were females, representing a striking reversal of the “gender gap” in cystic fibrosis, and that they have delayed, but equally severe disease.”

Cystic fibrosis (CF), an inherited disease of the lungs and digestive system, affects about 30,000 people in the United States and is the most common genetic disease among Caucasians. A single defective gene causes a missing or non-functional channel for chloride to travel into and out of cells. Lack of this channel disrupts the water balance in the lungs of CF patients, causing the development of thick, dehydrated mucus, which serves as a fertile environment for bacterial growth. Most patients die of respiratory failure brought on by repeated severe bacterial infections in the lungs.

In 1962 the median predicted survival for children with cystic fibrosis was 10 years. Today, it is 37, and children diagnosed today can expect to live into their 50s. Improved care is helping patients live longer. In addition, many more patients with non-traditional symptoms are being diagnosed for the first time as adults.
These two groups – those diagnosed as children and those diagnosed for the first time as adults – comprise two distinct populations of CF patients over 40. Those diagnosed as adults usually have a genetic mutation that produces a partially functional gene and a slightly different set of symptoms from those diagnosed as children. Most commonly, they have functional pancreases and fewer digestive problems.

Dr. Nick and his colleagues analyzed epidemiological and health data on 156 CF patients over 40 year of age who receive care at National Jewish Health, the largest adult cystic fibrosis clinic in the nation. In addition, data were analyzed on nearly 3,000 patients from around the nation who were included in the Cystic Fibrosis Foundation Patient Registry from 1992-2007.

The researchers found that the fate of females changes considerably in the older CF population. It has long been recognized that a “gender gap” is present in CF, favoring males. Historically, females have been diagnosed later, had a poorer prognosis, and survived fewer years than males.

Accordingly, Dr. Nick’s analysis showed that fewer females diagnosed as children survived to age 40. However, among those diagnosed as adults, females represented a significant majority, accounting for 72 percent of patients in Colorado and 54 percent nationally. Among the adult diagnosed patients, females survived on average 9 to 14 years longer than males.

The complex factors that account for the differential fate of female CF patients is not understood, although Dr. Nick believes it could be a mixture of behavioral and biological factors.

Dr. Nick’s findings also indicate that patients diagnosed as adults do not really have milder diseases — as is commonly believed — just a delayed onset of an equally severe form of the disease. Although patients diagnosed as adults live longer than those diagnosed as children, the adult-diagnosed patients lose lung function as rapidly those diagnosed in childhood, and approximately 85% die of respiratory failure or post-transplant complications.

Dr. Nick believes there is a significant number of adults whose CF remains undiagnosed. His analysis indicates that once those patients are accurately diagnosed, proper care can significantly improve their health. Patients diagnosed as adults and subsequently followed at a CF center reversed progressive lung function decline and improved their lung function for at least four years.
Older patients commonly do not get specialized CF care. It is generally recognized that the team approach to treatment provided by the 112 CF Foundation-accredited Care Centers results in better clinical outcomes. However, less than half of long-term CF survivors continued to be seen at CF Centers as they pass 40 years, with the fewest among the adult-diagnosed patients.

“In the coming years, more and more cystic fibrosis patients will be living into their 40s, 50s and beyond,” said Dr. Nick. “Our findings concerning the role of gender, in survival, progression of disease, and type of care in current long-term survivors provides important insights that will help us prepare for better treatment of the steadily aging CF population.”

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Study Finds US Children Taking More Prescription Drugs

In a report released by Medco Health Solutions, it was found that children were the leading growth demographic for the pharmaceutical industry in 2009, with an increase of prescription drug use among youngsters almost four times higher than the overall population.

More than one in four insured children in the USA and nearly 30 percent of adolescents 10 to 19 years old took at least one prescription medication to treat a medical condition in 2009, according to analysis of pediatric medication use conducted as part of Medco’s drug trend study issued on Wednesday.

Medco foresees the overall spending in pharmaceuticals to increase up to 18 percent through 2012, driven by diabetes, cancer and rheumatology treatments. Spending is expected to rise nearly 5 percent this year, and 4 to 6 percent the next two years.

The overall increases will be held back due to many branded drug sales that will succumb to competition from cheap generic versions by the end of 2012.

Although increases in drug use by children could fuel much higher healthcare costs as those young patients enter adulthood, Medco said.

“Looking at children was the real shocker for us,” Dr Robert Epstein, Medco’s chief medical officer, said during a conference call with Reuters.

In the past nine years, the most substantial increases in medications to children were from drugs for conditions not typically associated with them, such as type 2 diabetes and antipsychotic, Medco said. Some long-term childhood health issues also saw large increases, such as asthma.

What remains surprising, Epstein noted, is the “type of drugs these kids are taking. All these adult drugs are popping up in children, which is really disturbing.”

“The obesity problem is contributing not just to diabetes but to a lot of other problems,” he said, noting a 50 percent increase since 2001 in the use of cholesterol lowering drugs among those aged 10 to 19, a 24 percent increase in use of blood pressure medicines, and a whopping 147 percent jump in adolescents taking heart burn and acid reflux drugs.

Data for the study was collected from Medco’s top 200 clients, representing more than 40 million people. Childhood use of medications for type 2 diabetes, a disease once referred to as adult onset diabetes, rose 5.3 percent in 2009 and is up more than 150 percent since 2001, the study found. Girls between the ages of 10 and 19 showed the greatest increase at nearly 200 percent in nine years.

“We’ve got to get our arms around some very fast lifestyle modification or we’re going to have a real problem, having these adult illnesses show up in children who will have a changing life expectancy if they’re going to be sick from a very young age,” Epstein cautioned.

Another trend was the increase in children taking antipsychotics — powerful drugs used to treat schizophrenia, but more recently being prescribed for other conditions, such as depression and anxiety.

Use of antipsychotics has doubled since 2001 and more than doubled for girls, according to Medco’s analysis.

Some antipsychotic use has been linked to significant weight gain and the increased risk of developing type 2 diabetes.

Use of antidepressants in youngsters dropped by 23 percent since 2004. The decline came after the US Food and Drug Administration released warnings of the increased risk of suicidal thoughts by children using those medications.

Childhood asthma rates are also rising, Medco found. Respiratory drug use grew 5 percent among children in 2009 and up 42 percent since 2001. Attention deficit hyperactivity disorder (ADHD) drug use was up 9.1 percent in 2009, although, the increase was more pronounced among young adults.

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Researchers Hope To ‘Reprogram’ Stem Cells With Human Heart Tissue

Spanish researchers have employed for the first time adult cells extracted from a human heart to turn stem cells from adipose tissue into cardiac myocytes. In other words, they achieved to “reprogram” adult stem cells, which might improve treatments for heart disease therapeutical.

At present, the use of stem cells in treatments for heart disease is one of the most common practices. However, working with stem cells without targeting heart tissue negatively affects the efficacy of treatments. Therefore, inducing cell differentiation into cardiac muscle (cardiomyocytes) may be one of the best options in the treatment of these pathologies.

For the purpose of this study, researchers isolated adult human stem cells from lipoaspiration. Subsequently, these cells were temporarily permeabilized and exposed to a human-auricle cell extract. Then, these cells were recovered in culture.

Morphological Changes

After 21 days in culture, the cells differentiated towards a cardiac myocyte phenotype, which was demonstrated by expression of morphological changes (appearance of binuclear cells with striated fibers and ramifications), detection of cardiospecific markers through inmunofluorescence, and the presence of cardiac muscle-related genes that were analyzed through RT-PCR; and finally, by expression of reverse transcription. Thus, mesenchimal stem cells acquired a cardiac phenotype.

This study was conducted by Macarena Perán, Juan A. Marchal, Elena L³pez, Manuel Jim©nez-Navarro, Houria Boulaiz, Fernando Rodríguez-Serrano, Esmeralda Carrillo, Gema Sánchez-Espín, Eduardo de Teresa, David Tosh y Antonia Aránega, researchers from the University of Jaen (Spain), the University of Granada, the Hospital Clínico Universitario of Malaga and the University of Bath (United Kingdom). It is going to be published on the Journal Cytotherapy, the official reporting organ of the International Society for Cellular Therapy (ISCT).

This technique could be used in the future for regeneration of cardiac muscles through the use of cells directly extracted from the patient. However, physicians have remarked that, at present, this research is in its earlier stages, and it will be a long time until it has any therapeutical use.

Currently, researchers are preparing a new approach for introducing the cell extract into the target cell (by using a cell microinjector) that will allow them to obtain a larger number of viable differentiated cells, which is essential for their having any therapeutical use. The following step is to use animal models to validate differentiated cells’ functionality. Finally, a number of clinical trials should be conducted to assess the viability of this technique in human patients.

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Dynamic HIV Testing

A relatively simple electronic gadget could speed up HIV/AIDS diagnostics and improve accuracy particularly in parts of the world with very limited access to healthcare workers. The device is described in the International Journal of Biomedical Engineering and Technology.

Ali El Kateeb of the Electrical and Computer Engineering Department, at the University of Michigan, in Dearborn, explains that rapid blood tests for diagnosing HIV have become widely available but are prone to human error in reading the results. The currently available kits require a drop of blood placed in a well containing reactant test chemicals. A positive test produces a colored band perpendicular to a “control” bar that appears only if the test procedure was carried out correctly. El Kateeb points out that even such an apparently simple test must be carried out by a trained technician and in a clinic or laboratory.

Unfortunately, errors in reading the test pattern can occur and are particularly common in parts of the world where there is a dearth of qualified technicians. The result is that false positives that have a negative psychological effect on patients are common while false negatives mean patients thinking they are free of the virus will continue to infect others unwittingly.

Previously, El Kateeb had developed a static imaging device -, akin to a simple digital camera, that could be used to identify valid and positive test results using a built-in computer chip modified to run a dedicated pattern recognition program. The static approach was not entirely successful because it relies on precise manufacture of the test kit as well as accurate placement of the “eye” of the imaging device above the test kit. Now, El Kateeb has developed a “dynamic” version of the device that overcomes this significant drawback.

In the dynamic approach, the built-in software embedded on a Reconfigurable System-On-Chip, first determines the relative position of the detector’s 384 Ö 288 pixel eye relative to the test kit well, illuminated by four LEDs, using a rapid analysis of pixel density in the captured image. The software then identifies the control bar and detects whether or not the perpendicular test bar is present regardless of their exact positioning within the well.

El Kateeb says this dynamic detection technique is 100% accurate in laboratory testing. The device is inexpensive, portable and self-contained and so could be made available to small clinics and pharmacies at low cost. Moreover, it requires no technician intervention, which will make it useful for rural areas in the developing world.

“An accurate dynamic testing approach for analyzing images produced by quick HIV kits” in Int. J. Biomed. Eng. Technol., 2010, 4, 151-160

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Users Not Downloading Music From Phones

Less than 2 percent of mobile users in the U.S. and western Europe used their phone to download music during the first quarter.

Industry tracker comScore said on Wednesday that although 24 percent listened to music on their phone, the vast majority loaded the tracks on their handset from music they already had on a computer.

Services like Nokia’s Comes With Music and advertising-funded start-up Spotify, which launched in late 2008, have tried to break into the digital music market dominated by Apple’s iTunes.

Nokia does not say exactly how many users it has for Comes With Music, which comes free with certain handsets and allows users to download millions of tunes to their phones or PC for a year and keep them afterwards.

Stockholm-based Spotify has over 7 million users.  It has a free service for listeners who accept advertising, and paid-for services without ads.

In 2007, Rhapsody America was one of the first services to offer unlimited music packages in an attempt to rival iTunes. 

ComScore’s data was gathered from users between the ages 13 and over in Britain, France, Germany, Italy, Spain and the United States.

The numbers also reveal that 82 percent of users in five European countries used their phone for text messaging, 35 percent for applications like games, and 25 percent browsed the Web on their phone.

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Physicists On Track To Understanding Vastness Of Matter

Physicists at Fermilab have discovered a clue as to why the world around us is composed of normal matter and not anti-matter.

Today, anti-matter is rare, but it can be produced by atom smashers, in nuclear reactions, or by cosmic rays.

However, physicists believe the Big Bang should have produced equal amounts of matter and its opposite.

The DZero experiment at Fermilab in Illinois has now produced results that provide a clue as to what happened to all the anti-matter.

Many researchers regard this as one of the biggest mysteries in cosmology.

The data from the experiment offers hints of new physics beyond what can be explained by current theories.

For each basic particle of matter, there exists an anti-particle with the same mass but the opposite electric charge.

For example, the negatively charged electron has a positively charged anti-particle called the positron.

However, if a particle and its anti-particle collide, they are “annihilated” in a flash of energy, yielding new particles and anti-particles.

If a similar process occurred at the beginning of the Universe then it would have left us with equal amounts of matter and anti-matter.

However, today we live in a universe made up overwhelmingly of matter.

Researchers working on the DZero experiment observed collisions of protons and anti-protons in Fermilab’s Tevatron particle accelerator.

They discovered that these collisions produced pairs of matter particles more often than they yielded anti-matter particles.

There is a 1 percent difference in the production of pairs of muon (matter) particles and pairs of anti-muon (anti-matter) particles during these collisions.

“Many of us felt goose bumps when we saw the result,” Stefan Soldner-Rembold, one of the spokespeople for DZero, told BBC News.

“We knew we were seeing something beyond what we have seen before and beyond what current theories can explain.”

The overwhelming numbers of matter in the Universe are only possible if there are differences in the behavior of particles and anti-particles.

Physicists had already seen these differences, but they were too small to explain why the Universe appears to prefer matter over anti-matter.

Previously, these observations were fully consistent with the current theory known as the Standard Model.  This theory explains the interactions of sub-atomic particles.

Researchers wrote in the journal Physical Review D that the new findings show much more significant “asymmetry” of matter and anti-matter.

If the results are confirmed by other experiments, then the effect seen by the DZero team could move researchers along in their efforts to try and understand the dominance of matter in today’s Universe.

The data presage results expected from another experiment, called LHCb.

LHCb, which is based at the Large Hadron Collider near Geneva, was specifically designed to shed light on this question in particle physics.

Dr. Tara Shears, a particle physicist at the University of Liverpool who works on LHCb and CDF, told BBC “It’s not yet at the stage of a discovery or an explanation, but it is a very tantalizing hint of what might be.”

Shears, who is not a member of the DZero team, added: “It certainly means that LHCb will be eager to look for the same effect, to confirm whether it exists and if it does, to make a more precise measurement.”

Image Caption: DZero Detector with large liquid argon calorimeter.

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Consumer Confidence: When Our Choices Make The Most Sense

Why do we feel confident about some choices while we question others? According to a new study in the Journal of Consumer Research, it’s a combination of how easy the choice seems and whether we’re thinking concretely or abstractly.

“We found that subjective feelings of ease experienced during judgments (e.g., choosing a digital camera, art, movie, or charity) can increase or decrease consumers’ confidence in their choice and the amount of donation depending on whether consumers are thinking, respectively, concretely or abstractly,” write authors Claire I. Tsai (University of Toronto and Ann L. McGill (University of Chicago).

The researchers found that abstract thinking and concrete thinking determine the theory consumers adopt to interpret their subjective experiences. “Consider, for example, the feeling of difficulty one experiences when studying for an exam,” the authors write. “The subjective experience of difficulty can lead to a feeling of high confidence, providing this difficulty is interpreted as effort put forth to ensure a good grade. On the other hand, the same subjective experience can lead to feeling very low confidence about the grade, if processing difficulty is interpreted as inability to process the study materials.”

The authors conducted three experiments using a sample of 750 participants. They tested a variety of product categories: electronic products, art, movies, and charitable giving. They manipulated ease of processing by varying the clarity of print advertisements or the number of thoughts participants were asked to generate to explain their choices. In addition, they manipulated abstract and concrete thinking by asking participants to consider issues that weren’t related to the product categories. “Specifically, we induced abstract thinking (or concrete thinking) by asking participants to focus on the why (or how) aspects of an event,” the authors write.

“As predicted, we found that when consumers are thinking more concretely and focusing on details of product information, ease of processing””making a choice based on a clear ad or a few reasons””increases confidence,” the authors write. “Difficulty of processing””making a choice based on a blurry ad or having to generate many reasons to explain one’s choice””decreases confidence.”

Claire I. Tsai and Ann L. McGill. “The Effects of Fluency and Construal Level on Confidence Judgments.” Journal of Consumer Research: December 2010.

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DanActive Reduced Rate Of Common Infections In Daycare Children

The probiotic yogurt-like drink DanActive reduced the rate of common sicknesses such as ear infections, sinusitis, the flu and diarrhea in daycare children, say researchers who studied the drink in the largest known probiotic clinical trial to be conducted in the United States. An additional finding, however, showed no reduction in the number school days missed. The study led by Daniel Merenstein of Georgetown University School of Medicine (GUSOM), was funded by The Dannon Company, Inc., and published online May 19 in the European Journal of Clinical Nutrition.

Probiotic foods are continuing to increase in popularity and some are marketed for the potential benefits of probiotics such as Lactobacillus casei (L. casei) DN-114 001, the probiotic in DanActive. Studies in other countries have found that probiotics, which are live micro-organisms, produce positive health benefits in children, including the reduction of school days missed due to infections. However, most of the research was conducted outside the United States in structured conditions not comparable to normal everyday living.

“We were interested in a study that resembled how children in the U.S. consume drinks that are stored in home refrigerators and consumed without study personnel observation,” says the study’s lead author Daniel Merenstein, MD, director of research in the Department of Family Medicine at GUSOM.

“”¦To our knowledge this is the largest probiotic clinical trial conducted in the U.S. and provides much needed data,” say the authors of the study. “We studied a functional food, not a medicinal product; parents will thus feed their children without any physician input and we felt it was best to assess [the drink] under similar conditions.”

The study, titled DRINK (Decreasing the Rates of Illness in Kids), was a randomized, double-blind, placebo-controlled study ““ the gold standard in clinical research design. It included 638 healthy children, aged three to six, who attended school five days a week. Parents were asked to give their child a daily strawberry yogurt-like drink. Some of the drinks were supplemented with the probiotic strain L. casei DN-114 001 (DanActive), while others had no probiotics (placebo). Neither the study coordinators, the children, nor the parents knew which drink was given to which participant until the study ended. In addition to phone interviews with researchers, parents kept daily diaries of their child’s health and the number of drinks consumed.

Researchers found a 19 percent decrease of common infections among the children who drank the yogurt-like drink with L. casei DN-114 001 compared to those whose drink did not have the probiotic. More specifically, those who drank DanActive had 24 percent fewer gastrointestinal infections (such as diarrhea, nausea, and vomiting), and 18 percent fewer upper respiratory tract infections (such as ear infections, sinusitis and strep). However, the reduction in infections did not result in fewer missed school days or activities ““ also a primary outcome of the study.

“Our study had mixed results,” says Merenstein. “Children in school or daycare are especially susceptible to these illnesses. We did find some differences in infection rates but this did not translate to fewer missed school days or change in daily activity. It is my hope that safe and tolerable ways to reduce illnesses could eventually result in fewer missed school days which means fewer work days missed by parents.”

“It is important that more of these products are put under the microscope by independent academic researchers,” he concludes.

In addition to Merenstein, the study’s authors include Megan Murphy, GUMC; Ali Fokar, MPH, Medstar Research Institute; Rohini K. Hernandez MPH, MedStar Research Institute; Haewon Park, MPH, GUMC; Hala Nsouli, MPH, MedStar Research Institute; Mary Ellen Sanders, PhD, Dairy & Food Culture Technologies; Barbara A Davis, PhD, The Dannon Company, Inc.; Violeta Niborski, PhD, The Dannon Company, Inc.; Francoise Tondu, MSc, Danone Research; and Nawar M. Shara, PhD, MedStar Research Institute.

Davis was an employee of The Dannon Company, Inc. during the study. Niborski and Tondu were employees of Danone Research during the study. Sanders consults for numerous probiotic companies, including The Dannon Company. No other authors report related financial interests.

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Tomb Discovered Inside Southern Mexico Pyramid

On Monday, archaeologists in southern Mexico announced they have found a 2,700-year-old tomb of a dignitary inside a pyramid that may be the oldest type of burial documented in Mesoamerica.

The tomb held a man believed to be aged at about 50 who was buried with jade collars, pyrite and obsidian artifacts and ceramic vessels.  Archaeologists Emiliano Gallaga said the tomb dates between 500 and 700 B.C.

Gallaga told the Associated Press (AP) that based on the layers in which it was found and the tomb’s unusual wooden construction, “we think this is one of the earliest discoveries of the use of a pyramid as a tomb, not only as a religious site or temple.”

Pre-Hispanic cultures built pyramids mainly as representations of the levels leading from the underworld to the sky.

The tomb was discovered at a site built by Zoque Indians in Chiapa de Corzo, in southern Chiapas state.  It may be about 1,000 years older than the better-known pyramid tomb of the Mayan ruler Pakal at the Palenque archaeological site, also in Chiapas.

The man was buried in a stone chamber.  He is believed to be a high priest or ruler of Chiapa de Corzo, a prominent settlement at the time.  Marks in the wall indicate that wooden roof supports were used to create the tomb, but the wood long ago collapsed under the weight of the pyramid built above.

Archaeologist started to dig into the pyramid mound in April in order to study the internal structure when they discovered a wall whose finished stones appeared to face inward.  Last week, they uncovered the 13 ft. by 9 ft. tomb chamber about 19 ft. or 22 ft. beneath what had been the pyramid’s peak.

The body of a 1-year-old child was laid carefully over the man’s body inside the tomb, while that of a 20-year-old male was tossed into the chamber with less care, perhaps sacrificed at the time of the burial.

The older man was buried with jade and amber collars and bracelets and pearl ornaments.  His face was covered with a funeral mask with obsidian eyes.

A tomb of a woman was nearby, also about 50, and contained similar ornaments.

The ornaments and some of the 15 ceramic vessels found in the tomb show influences from the Olmec culture, which is considered the “mother culture” of the region.

The discovery has raised the possibility that Olmec pyramids might contain similar tombs of dignitaries, especially at well-known sites such as La Venta. 

Olmec pyramids have not been excavated, mostly due to the high water table and humidity of their Gulf coast sites not being as conducive to preserving buried human remains.

“The Olmec sites have not been explored with the depth they deserve,” Lynneth Lowe, an archaeologist at Mexico’s National Autonomous University who participated in the dig, told AP.  “It is possible that thus type of tomb exists at La Venta.”

Experts said that despite the Chiapa de Corzo tomb’s location, it is not clear the later Maya culture learned or inherited the practice of pyramid burials from the Zoques or Olmecs.

“While I have no doubt it relates to Olmec, there is no tie to Maya at this time per se,” archaeologist Lisa Lucero of the University of Illinois, who was not involved in the Chiapa de Corzo project, told AP.  “There are scholars who would like to see Olmec-Maya connections so they can show direct ties from Olmec to Maya, but this would be difficult to show with evidence at hand.”

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Gulf Oil Leak Bigger Than Expected

Experts warned Friday that much more oil is spewing into the Gulf of Mexico from a sunken British Petroleum oil rig than officials had estimated.

National Public Radio (NPR) reported that Steven Wereley, an associate professor of mechanical engineering at Purdue University, said 14 times more oil was spewing into the sea than the officially estimated 5,000 barrels a day.  Expert opinion puts the estimate at three million gallons of oil a day spilling out into the Gulf.

Wereley analyzed the sea-floor oil geyser at NPR’s request by using a technique called particle image velocimetry, which tracks particles and calculates how fast they move.

Timothy Crone of Columbia University’s Lamont-Doherty Earth Observatory analyzed the undersea oil gusher for NPR by using a different method and came up with a similar figure.

NPR said Eugene Chiang, a professor of astrophysics at the University of California, Berkley, also got a similar answer just using a pencil and paper.

Florida State University oceanographer Ian R. MacDonald told the New York Times that he analyzed the slick by using satellite imagery, and his calculations suggested that the leak could easily be spewing four to five times as much oil into the Gulf as previously estimated.

The findings suggest the oil spill is the worst environmental disaster in U.S. history, eclipsing the 1989 Exxon Valdez spill off Alaska’s coast.

However, BP disputed the experts’ analyses by saying there is no reliable method to calculate how much oil is flowing from the broken pipe on the sea floor.

Doug Suttles, BP’s chief operating officer, said Friday on the CBS Early Show that he thought the official estimate of 5,000 barrels of oil pouring into the sea was “reasonable but higher uncertain.”

A BP spokesman told AFP, the 5,000 barrels a day (210,000 gallons) figure was provided by NOAA, a U.S. federal agency.

According to The New York Times, BP has estimated that there are at least 50 million barrels of oil in the undersea reservoir that is gushing into the Gulf.

BP chief executive Tony Hayward played down the size of the spill saying it was “tiny” when compared to the expanse of water it was pouring into.

“The Gulf of Mexico is a very big ocean. The amount of volume of oil and dispersant we are putting into it is tiny in relation to the total water volume,” BP chief executive Tony Hayward told British daily The Guardian.

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Mathematical Method May Help Tame Big Data

Networks permeate modern life, from Facebook to political allegiances. Now University of North Carolina at Chapel Hill mathematicians and colleagues have developed a new technique for examining networks to help identify patterns and see how connections evolve.

A paper describing their research appears in the May 14, 2010 edition of Science.

One of the most prominent areas of network science is the study of what’s called the “community structure” of a network. But until now, key methods could only detect “communities” (well-connected groups of nodes) in networks that don’t change over time and only have one type of connection.

Of course, most networks in real life are more complicated, said Peter J. Mucha, Ph.D., associate professor of mathematics in the UNC College of Arts and Sciences and lead author of the paper. The new technique offers the ability to examine networks that vary over time and have multiple kinds of connections.

“It’s “Ëœconnecting the dots’ on steroids,” Mucha said. “This method offers new potential for handling a fire hose of information, whether you’re looking at an online social network or a real-world web of people or things.”

Mucha and his colleagues derived their new method from mathematical principles and applied it to a few example datasets, including the complete historical roll call voting record in the U.S. Senate through 2008, and a set of Facebook profiles from almost 1,700 students at an anonymous American university including photo tags and housing information. Mucha said their community detection methodology identified some interesting details, including points of historical transition in the Senate and indications of different groups among Facebook users.

“Facebook is a good example of a tangled web of connections,” he said. “Within it, there are groups of people who are more tightly connected to each other than they are to other groups. If you map out every individual “Ëœfriend’ connection and trace one connection to another, you’ll see some clumpiness to that network.”

But a more complete analysis of the network would include information about the myriad of different types of connections. For example, by analyzing data such as individuals’ profile details, photo tags, Facebook “likes” and recommendations and messages, it might be possible to identify other connections and groups that may be subtle or not explicitly obvious, Mucha said. (The paper in Science did not look at all such information)

The new method divides a network into multiple “slices,” with each slice representing the network at one snapshot in time, or a different set of connections between the individuals within it. These slices are then combined and ““ by using a variety of computer algorithms ““ analyzed to identify communities.

Mucha’s primary interest in network analysis is applying methodologies to real world data, including congressional relationships.

With the new community detection method, researchers should be able to dig deeper to examine the relationships among different groups in dynamic, multiplex data. Identifying community structures in a network might help to model processes and provides a signal about the underlying system, such as legislative polarization or the influence of various factors and forces, he said.

“Looking at the way legislators vote, it’s usually easy to quickly group them into Republicans and Democrats, but that’s really just a first pass at the data,” he said. “Those legislators might be connected in many ways “” the states they represent, who they’ve received political donations from, their caucuses or committee assignments, even where their offices are located in the building. Combining such information in a meaningful way helps us explore ““ and potentially make more sense of ““ legislative data.”

Mucha believes another potential application for the new method is modeling the spread of diseases. He plans new research in that area.

Two UNC undergraduates ““ Thomas Richardson, class of 2008, and Kevin Macon, class of 2010 ““ are among the paper’s co-authors, along with Mason A. Porter of Oxford University and Jukka-Pekka Onnela of Harvard University.

Mucha is also a member of the UNC’s Carolina Center for Interdisciplinary Applied Mathematics and the Institute for Advanced Materials, Nanoscience and Technology. His community detection research is supported by a National Science Foundation CAREER Award.

Image Caption: A visualization of a network of Facebook connections, from previous related research by Mucha and others. Credit: Amanda L. Traud, Christina Frost, UNC-Chapel Hill. [ View PDF ]

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2 Proteins Are Key For Normal-sized Brains

Findings could shed light on the evolution of human head size

In work that may one day correct or prevent genetic conditions tied to smaller-than-normal brains and shed light on the evolution of human head size, researchers at MIT’s Picower Institute for Learning and Memory analyzed the interaction of two proteins key to brain development.

Neurogenesis is the process through which neurons are created during prenatal development to populate the growing brain. Li-Huei Tsai, director of the Picower Institute and Picower Professor of Neuroscience, found that two proteins–Cdk5rap2 and pericentrin””work together to regulate neural growth in the developing brain. Loss of function of these proteins results in human disorders such as primary autosomal recessive microcephaly (MCPH) and Majewski osteodysplastic primordial dwarfism, type II (MOPDII), genetic conditions characterized in part by abnormally small head circumference.

An understanding of these rare genetic disorders may offer insight into one of the most striking differences between us and our closest living relatives: brain size and cognitive ability.

The researchers show that Cdk5rap2 and pericentrin interact with one another to regulate proliferation of neural progenitor cells that give rise to the brain layer called the neocortex. Pericentrin recruits Cdk5rap2 to structures within the neural progenitor cells, and loss of Cdk5rap2 results in decreased cell proliferation.

“Given the link between head circumference, intelligence deficits and psychiatric disorders, these findings have implications for our understanding of how abnormalities in brain development can play a role in a number of diseases,” said Tsai, a Howard Hughes Medical Institute investigator and the director of the neurobiology program at the Broad Institute’s Stanley Center for Psychiatric Research. In addition to leading to potential treatments for MCPH and MOPDII, the work may also shed light on the increase in brain size during human evolution.

How They Did It: To examine the role of CdkSrap2 in neurogenesis, the researchers knocked out Cdk5rap2 in mouse embryos during brain development. Effects included an altered distribution of cells among the cortical layers of the brain.

Next Steps: The researchers are now exploring how these proteins and others mutated in individuals with MCPH may play a role in regulating signaling pathways relevant to brain development. “We would like to gain a broader understanding of how disrupted regulation of progenitor proliferation can impact brain development,” Tsai said. “Ultimately, we hope to gain insight into how defects in these processes can contribute to diseases characterized by intelligence deficits and poor mental health.”

Source: “Cdk5rap2 Interacts with Pericentrin to Maintain the Neural Progenitor Pool in the Developing Neocortex,” Joshua J. Buchman, Huan-Chung Tseng, Ying Zhou, Christopher L. Frank, Zhigang Xie, and Li-Huei Tsai, in Neuron, published May 13, 2010.

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Scientists Create Molecular ‘Robot’

A team of scientists from Columbia University, Arizona State University, the University of Michigan, and the California Institute of Technology (Caltech) have programmed an autonomous molecular “robot” made out of DNA to start, move, turn, and stop while following a DNA track.

The development could ultimately lead to molecular systems that might one day be used for medical therapeutic devices and molecular-scale reconfigurable robots””robots made of many simple units that can reposition or even rebuild themselves to accomplish different tasks.

A paper describing the work appears in the current issue of the journal Nature.

The traditional view of a robot is that it is “a machine that senses its environment, makes a decision, and then does something””it acts,” says Erik Winfree, associate professor of computer science, computation and neural systems, and bioengineering at Caltech.

Milan N. Stojanovic, a faculty member in the Division of Experimental Therapeutics at Columbia University, led the project and teamed up with Winfree and Hao Yan, professor of chemistry and biochemistry at Arizona State University and an expert in DNA nanotechnology, and with Nils G. Walter, professor of chemistry and director of the Single Molecule Analysis in Real-Time (SMART) Center at the University of Michigan in Ann Arbor, for what became a modern-day self-assembly of like-minded scientists with the complementary areas of expertise needed to tackle a tough problem.

Shrinking robots down to the molecular scale would provide, for molecular processes, the same kinds of benefits that classical robotics and automation provide at the macroscopic scale. Molecular robots, in theory, could be programmed to sense their environment (say, the presence of disease markers on a cell), make a decision (that the cell is cancerous and needs to be neutralized), and act on that decision (deliver a cargo of cancer-killing drugs).

Or, like the robots in a modern-day factory, they could be programmed to assemble complex molecular products. The power of robotics lies in the fact that once programmed, the robots can carry out their tasks autonomously, without further human intervention.

With that promise, however, comes a practical problem: how do you program a molecule to perform complex behaviors?

“In normal robotics, the robot itself contains the knowledge about the commands, but with individual molecules, you can’t store that amount of information, so the idea instead is to store information on the commands on the outside,” says Walter. And you do that, says Stojanovic, “by imbuing the molecule’s environment with informational cues.”

“We were able to create such a programmed or ‘prescribed’ environment using DNA origami,” explains Yan. DNA origami, an invention by Caltech Senior Research Associate Paul W. K. Rothemund, is a type of self-assembled structure made from DNA that can be programmed to form nearly limitless shapes and patterns (such as smiley faces or maps of the Western Hemisphere or even electrical diagrams). Exploiting the sequence-recognition properties of DNA base pairing, DNA origami are created from a long single strand of DNA and a mixture of different short synthetic DNA strands that bind to and “staple” the long DNA into the desired shape. The origami used in the Nature study was a rectangle that was 2 nanometers (nm) thick and roughly 100 nm on each side.

The researchers constructed a trail of molecular “bread crumbs” on the DNA origami track by stringing additional single-stranded DNA molecules, or oligonucleotides, off the ends of the staples. These represent the cues that tell the molecular robots what to do””start, walk, turn left, turn right, or stop, for example””akin to the commands given to traditional robots.

The molecular robot the researchers chose to use””dubbed a “spider”””was invented by Stojanovic several years ago, at which time it was shown to be capable of extended, but undirected, random walks on two-dimensional surfaces, eating through a field of bread crumbs.

To build the 4-nm-diameter molecular robot, the researchers started with a common protein called streptavidin, which has four symmetrically placed binding pockets for a chemical moiety called biotin. Each robot leg is a short biotin-labeled strand of DNA, “so this way we can bind up to four legs to the body of our robot,” Walter says. “It’s a four-legged spider,” quips Stojanovic. Three of the legs are made of enzymatic DNA, which is DNA that binds to and cuts a particular sequence of DNA. The spider also is outfitted with a “start strand”””the fourth leg””that tethers the spider to the start site (one particular oligonucleotide on the DNA origami track). “After the robot is released from its start site by a trigger strand, it follows the track by binding to and then cutting the DNA strands extending off of the staple strands on the molecular track,” Stojanovic explains.

“Once it cleaves,” adds Yan, “the product will dissociate, and the leg will start searching for the next substrate.” In this way, the spider is guided down the path laid out by the researchers. Finally, explains Yan, “the robot stops when it encounters a patch of DNA that it can bind to but that it cannot cut,” which acts as a sort of flypaper.

Although other DNA walkers have been developed before, they’ve never ventured farther than about three steps. “This one,” says Yan, “can walk up to about 100 nanometers. That’s roughly 50 steps.”

“This in itself wasn’t a surprise,” adds Winfree, “since Milan’s original work suggested that spiders can take hundreds if not thousands of processive steps. What’s exciting here is that not only can we directly confirm the spiders’ multistep movement, but we can direct the spiders to follow a specific path, and they do it all by themselves””autonomously.”

In fact, using atomic force microscopy and single-molecule fluorescence microscopy, the researchers were able to watch directly spiders crawling over the origami, showing that they were able to guide their molecular robots to follow four different paths.

“Monitoring this at a single molecule level is very challenging,” says Walter. “This is why we have an interdisciplinary, multi-institute operation. We have people constructing the spider, characterizing the basic spider. We have the capability to assemble the track, and analyze the system with single-molecule imaging. That’s the technical challenge.” The scientific challenges for the future, Yan says, “are how to make the spider walk faster and how to make it more programmable, so it can follow many commands on the track and make more decisions, implementing logical behavior.”

“In the current system,” says Stojanovic, “interactions are restricted to the walker and the environment. Our next step is to add a second walker, so the walkers can communicate with each other directly and via the environment. The spiders will work together to accomplish a goal.” Adds Winfree, “The key is how to learn to program higher-level behaviors through lower-level interactions.”

Such collaboration ultimately could be the basis for developing molecular-scale reconfigurable robots””complicated machines that are made of many simple units that can reorganize themselves into any shape””to accomplish different tasks, or fix themselves if they break. For example, it may be possible to use the robots for medical applications. “The idea is to have molecular robots build a structure or repair damaged tissues,” says Stojanovic.

“You could imagine the spider carrying a drug and bonding to a two-dimensional surface like a cell membrane, finding the receptors and, depending on the local environment,” adds Yan, “triggering the activation of this drug.”

Such applications, while intriguing, are decades or more away. “This may be 100 years in the future,” Stojanovic says. “We’re so far from that right now.”

“But,” Walter adds, “just as researchers self-assemble today to solve a tough problem, molecular nanorobots may do so in the future.”

The other coauthors on the paper, “Molecular robots guided by prescriptive landscapes,” are Kyle Lund and Jeanette Nangreave from Arizona State University; Anthony J. Manzo, Alexander Johnson-Buck, and Nicole Michelotti from the University of Michigan; Nadine Dabby from Caltech; and Steven Taylor and Renjun Pei from Columbia University. The work was supported by the National Science Foundation, the Army Research Office, the Office of Naval Research, the National Institutes of Health, the Department of Energy, the Searle Foundation, the Lymphoma and Leukemia Society, the Juvenile Diabetes Research Foundation, and a Sloan Research Fellowship.

Image Caption: The latest installment in DNA nanotechnology has arrived: A molecular nanorobot dubbed a “spider” and labeled with green dyes traverses a substrate track built upon a DNA origami scaffold. It journeys towards its red-labeled goal by cleaving the visited substrates, thus exhibiting the characteristics of an autonomously moving, behavior-based robot at the molecular scale. Credit: Courtesy of Paul Michelotti

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Duodenocaval Fistula

Duodenocaval fistula (DCF) is an uncommon but lethal clinical entity. The high mortality has been attributed to the difficulty of diagnosis before attempts at definitive therapy.

A case report and review of literature to be published on May 14, 2010 in the World Journal of Gastroenterology addresses the diagnostic significance of computed tomography (CT) and magnetic resonance imaging (MRI) for DCF.

During a 2-mo stay in hospital, a small, low-density air bubble appeared in the inferior vena cava (IVC) and gradually enlarged on follow-up CT scans. MRI clearly demonstrated the high-signal enteric contrast medium or thrombus and signal-void air bubbles in the IVC. However, cavography did not reveal the thrombus in the IVC. The authors deemed that the thrombus was flushed out by the high-pressure injection of intravenous contrast medium. Noninvasive CT and MRI are suggested as a first-line investigation for diagnosis of DCF.

Reference: Guo Y, Zhang YQ, Lin W. Radiological diagnosis of duodenocaval fistula: A case report and literature review. World J Gastroenterol 2010; 16(18): 2314-2316

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Death Of A Star In 3 Dimensions

New computer models show in detail how supernovae obtain their shape

Massive stars end their lives in gigantic explosions, so called supernovae, and can become – for a short time – brighter than a whole galaxy, which is made up of billions of stars. Although supernovae have been studied theoretically by computer models for several decades, the physical processes happening during these blasts are so complex that until now astrophysicists could only simulate parts of the process and so far only in one or two dimensions. Researchers at the Max Planck Institute for Astrophysics in Garching have now carried out the first fully three-dimensional computer simulations of a core collapse supernova over a timescale of hours after the initiation of the blast. They thus could answer the question of how initial asymmetries, which emerge deep in the dense core during the very early stages of the explosion, fold themselves into inhomogeneities observable during the supernova blast.

While the great energy of the outburst makes these stellar explosions visible far out into the Universe, they are relatively rare. In a galaxy of the size of our Milky Way, on average only one supernova will occur in 50 years. About twenty years ago, a supernova could be seen even with the naked eye: SN 1987A in the Tarantula Nebula in the Large Magellanic Cloud, our neighboring galaxy. This relative closeness – “only” about 170,000 light years away – allowed many detailed observations in different wavelength bands over weeks and even months. SN 1987A turned out to be a core-collapse supernova, a so-called Type II event. It occurs when a massive star, which is at least nine times heavier than the sun, has burned almost all its fuel. The fusion engine in the center of the star begins to stutter, triggering an internal collapse and thus a violent explosion of the entire star. In the case of SN 1987A the star had about 20 solar masses at its birth.

SN 1987A is probably the best studied supernova and it is still a great challenge to develop and refine models of what was happening inside the dying star to produce its emission of radiation. One of the astonishing and unexpected discoveries in SN 1987A and many subsequent supernovae was the fact that nickel and iron – heavy elements that are formed near the center of the explosion – are mixed outward in big clumps into the hydrogen shell of the disrupted star. Nickel bullets were observed to propagate at velocities of thousands of kilometers per second, much faster than the surrounding hydrogen and much faster than predicted by simple hydrodynamic calculations in one dimension (1D), i.e., only studying the radial profile from the center outwards.

In fact, it turned out that the brightness evolution (the so-called light curve) of SN 1987A and of similar core-collapse supernovae can only be understood if large amounts of heavy core material (in particular radioactive nickel) are mixed outwards into the stellar envelope, and light elements (hydrogen and helium from the envelope) are carried inwards to the core.

The details of supernova explosions are very difficult to simulate, not only because of the complexity of the physical processes involved but also because of the duration and range of scales – from hundreds of meters near the center to tens of millions of kilometers near the stellar surface – that need to be resolved in ultimately three-dimensional (3D) computer models. Previously conducted simulations in two dimensions (2D, i.e., with the assumption of axial symmetry) indeed showed that the spherical shell structure of the progenitor star is destroyed during the supernova blast and large-scale mixing takes place. But the real world is three-dimensional and not all observational aspects can be reproduced by 2D models.

The new computer models of the team at the Max Planck Institute for Astrophysics can now for the first time simulate the complete burst in all three dimensions, from the first milliseconds after the explosion is triggered in the core to a time three hours later, when the shock breaks out of the progenitor star. “We found substantial deviations in our 3D models compared to previous work in 2D,” says Nicolay Hammer, the lead author of the paper, “especially the growth of instabilities and the propagation of clumps differ. These are not just minor variations; this effect determines the long-time evolution and ultimately the extent of mixing and observable appearance of core-collapse supernovae.”

In the 3D-simulations, metal-rich clumps have much higher velocities than in the 2D case. These “bullets” expand much more rapidly, overtaking material from the outer layers. “With a simple analytic model we could demonstrate that the different geometry of the bullets, toroidal versus quasi-spherical, can explain the differences observed in our simulations,” explains co-author Thomas Janka. “While we think that the differences between the 2D- and 3D-models that we found are probably generic, many features will depend strongly on the structure of the progenitor star, the overall energy and the initial asymmetry of the blast.”

“We hope that our models, in comparison to observations, will help us to understand how stellar explosions start and what causes them”, adds Ewald Mller, the third author of the paper. Investigating a wider variety of progenitor stars and initial conditions will therefore be the focus of future simulation work. In particular, a detailed model that reproduces all observational features of SN 1987A still remains a challenge.

Reference: N.J. Hammer, H.-Th. Janka, E. Mller. Three-dimensional simulations of mixing instabilities in supernova explosions. Astrophysical Journal 714 (2010) 1371-1385

Image 1: This is a three-dimensional explosion simulation at about 0.5 seconds after core ignited. The bluish, almost transparent surface is the shock front with an average radius of 1900 km. Credit: Image: MPA

Image 2: A star dies in 3-D: These snap-shots show the outward mixing of certain elements in the supernova explosion from two different viewing directions, 350 seconds after core ignition in the upper two panels and after 9000 seconds in the lower two panels, when the shock has broken out of the stellar surface. The surfaces denote the outermost radial locations of carbon (green), oxygen (red), and nickel (blue) with a constant mass fraction. Credit: Image: MPA

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Treatment Of Gum Disease May Lower Blood Sugar Levels In Type 2 Diabetes

Study suggests that treating serious gum disease in diabetics could mitigate risks

A study to be published in the latest issue of The Cochrane Library and led by researchers at the University of Edinburgh and supported by colleagues at the Peninsula Dental School, the University of Ottawa and UCL Eastman Dental Institute, suggests that the treatment of serious gum (periodontal) disease in diabetics with Type 2 diabetes may lower their blood sugar levels.

The research team analyzed randomized controlled trials of people with Type 1 and Type 2 diabetes who had also been diagnosed with periodontal disease. The team looked at 690 papers and included seven studies in the review that fulfilled pre-specified criteria for inclusion.

Their findings suggest that the treatment of periodontal disease can reduce blood sugar levels in Type 2 diabetes, although there was not enough available evidence to support the same benefit for those with Type 1 diabetes.

Current belief is that, when bacteria infect the mouth and cause inflammation, the resulting chemical changes reduce the effectiveness of insulin produced in the body, thus making it more difficult for diabetics to control their blood sugar.

The findings are key because many patients and health care professionals do not necessarily make the association between the treatment of gum disease and the control of blood sugar levels. The study suggests that the effective treatment of gum disease could have a positive impact on diabetic patients, especially those with Type 2 diabetes, because it good blood sugar control contributes to lowering the risk of serious complications linked to the condition, such as eye problems and heart disease.

Terry Simpson, lead author at the Edinburgh Dental Institute, said: “It would be wise to advise patients of the relationship between treating periodontal disease and the possibility of lowering their blood sugar levels. Additionally, an oral health assessment should be recommended as part of their routine diabetes management.”

David Moles, Professor of Oral Health Research and Director of Postgraduate Education and Research at the Peninsula Dental School, added: “In this study we have helped confirm a link between the effective treatment of gum disease and lower blood sugar levels in those with Type 2 diabetes. Now what are required are larger randomized trials to further study dental treatment and its long term outcomes for those with diabetes, including the possibility of marrying dental care for diabetics with wider diabetes support and treatment networks and closer collaboration between doctors and dentists.”

Type 1 diabetes is the type of diabetes that typically develops in children and young adults. In Type 1 diabetes the body stops making insulin and the blood glucose level goes very high. Treatment to control the blood glucose level is with insulin injections and a healthy diet. Other treatments aim to reduce the risk of complications and include reducing blood pressure if it is high, and to lead a healthy lifestyle.

Type 2 diabetes occurs mainly in people aged over 40, although it is affecting a growing number of younger people. The ‘first-line’ treatment is diet, weight control and physical activity. If the blood glucose level remains high despite these measures, then tablets to reduce the blood glucose level are usually advised. Insulin injections are needed in some cases. Other treatments include reducing blood pressure if it is high, lowering high cholesterol levels and also other measures to reduce the risk of complications.

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Spitzer Eyes Ancient City of Galaxies

Astronomers are a bit like archeologists as they dig back through space and time searching for remnants of the early universe. In a recent deep excavation, courtesy of NASA’s Spitzer Space Telescope, astronomers unearthed what may be the most distant, primitive cluster of galaxies ever found.

In a twist, however, this apparent ancestor to today’s “big cities” of grouped galaxies looks shockingly modern. Called CLG J02182-05102, the ancient cluster is dominated by old, red and massive galaxies, typical of present-day clusters. For example, it is similar to a young version of the Coma Cluster of today, which has had billions of more years to develop.

“We are seeing something already aged and red like a younger version of the Coma Cluster from a distant, bygone era,” said Casey Papovich, lead author of a new study and an assistant professor of physics and astronomy at Texas A&M University in College Station.

Papovich added, “it is as though we dug an archeological site in Rome and found pieces of modern Rome in amongst the ruins.”

ClG J02182-05102 might have indeed been ahead of its time. Just as Rome was the world’s biggest city more than 2,000 years ago with a population of about a million residents – a figure not again matched until the early 1800s in London – so too was this galactic grouping an advanced civilization for so early an era in the developing universe.

Galaxy clusters are the largest gravitationally bound structures in the universe and are thought to have formed piecemeal over cosmic time. For now, ClG J02182-05102 is the only known galactic grouping so far away in the past, and studying it will help researchers understand the overall history of how galaxies congregate and evolve.

A Cosmic Archeological Expedition

In their hunt for rare ancient cities in the early universe, Papovich and his team started with the largest extragalactic survey ever made. Called the Spitzer Wide-area InfraRed Extragalactic (SWIRE) survey, it observed a huge portion of the sky that could contain 250 full moons.

Because more light gathered means more information, the researchers looked at a cosmic region within this giant starscape that had also been studied by other instruments. These additional observations came from a survey combining light from Japan’s Subaru telescope – housed atop Mauna Kea, Hawaii – and the European Space Agency’s orbiting XMM-Newton telescope. The United Kingdom Infra-Red Telescope, also in Hawaii, provided infrared data along with another set of Spitzer observations called the Public Ultra Deep Sky survey.

When all these data were compiled, Spitzer’s infrared observations made dozens of distant galaxies jump out. “We would not have found this object without Spitzer because there is very little optical light coming from this group of galaxies,” said Papovich.

His team then obtained time on the Magellan telescope in Chile to study the faint light coming from ClG J02182-05102’s least-dim galaxies. This light allowed the astronomers to archeologically date the candidate cluster to 9.6 billion years ago.

With these observations, Papovich and his team confirmed that seven of ClG J02182-05102’s galaxies have nearly the same distance, suggesting they are part of a grouping of about 60 galaxies. Whether or not this association of galaxies fully qualifies as a gravitationally bound cluster will rely on further observations. Furthermore, the definition of a “cluster” itself remains unsettled, somewhat like the blurry distinctions between a city and a town, made trickier still given the limited light that makes it to our telescopes from these relics.

The Rise and Fall of CLG J02182-05102

For now, ClG J02182-05102 stands out as a greatly over-dense region of galaxies – a metropolis in a land of isolated villages. At its center regions loom red, monster galaxies containing about 10 times as many stars as our Milky Way galaxy. This puts them on par with the most mammoth galaxies in the nearby universe, which have grown fat through repeated mergers with other galaxies. These big galaxies are so uncharacteristic of those in the early universe that in some sense it is like finding modern skyscrapers in ancient Rome.

The Papovich et al paper was accepted for publication in the Astrophysical Journal on April 21, 2010. A subsequent study by Masayuki Tanaka of the Institute for the Physics and Mathematics of the Universe in Japan confirmed the discovery, and the work was the subject of a news release on May 10, 2010.

NASA’s Jet Propulsion Laboratory, Pasadena, Calif., manages the Spitzer Space Telescope mission for NASA’s Science Mission Directorate, Washington. Science operations are conducted at the Spitzer Science Center at the California Institute of Technology in Pasadena. Caltech manages JPL for NASA.

Written by Adam Hadhazy, NASA/JPL

Image Caption: A surprisingly large collections of galaxies (red dots in center) stands out at a remarkably large distance in this composite image combining infrared and visible-light observations. NASA’s Spitzer Space Telescope contributed to the infrared component of the observations, while shorter-wavelength infrared and visible data are provided by Japan’s Subaru telescope atop Mauna Kea, Hawaii. Image credit: NASA/JPL-Caltech/Subaru

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Chandra, XMM-Newton Eye Possible Location Of Missing Matter

Using observations with NASA’s Chandra X-ray Observatory and ESA’s XMM-Newton, astronomers have announced a robust detection of a vast reservoir of intergalactic gas about 400 million light years from Earth. This discovery is the strongest evidence yet that the “missing matter” in the nearby Universe is located in an enormous web of hot, diffuse gas.

This missing matter “” which is different from dark matter — is composed of baryons, the particles, such as protons and electrons, that are found on the Earth, in stars, gas, galaxies, and so on. A variety of measurements of distant gas clouds and galaxies have provided a good estimate of the amount of this “normal matter” present when the universe was only a few billion years old. However, an inventory of the much older, nearby universe has turned up only about half as much normal matter, an embarrassingly large shortfall.

The mystery then is where does this missing matter reside in the nearby Universe? This latest work supports predictions that it is mostly found in a web of hot, diffuse gas known as the Warm-Hot Intergalactic Medium (WHIM). Scientists think the WHIM is material left over after the formation of galaxies, which was later enriched by elements blown out of galaxies.

“Evidence for the WHIM is really difficult to find because this stuff is so diffuse and easy to see right through,” said Taotao Fang of the University of California at Irvine and lead author of the latest study. “This differs from many areas of astronomy where we struggle to see through obscuring material.”

To look for the WHIM, the researchers examined X-ray observations of a rapidly growing supermassive black hole known as an active galactic nucleus, or AGN. This AGN, which is about two billion light years away, generates immense amounts of X-ray light as it pulls matter inwards.

Lying along the line of sight to this AGN, at a distance of about 400 million light years, is the so-called Sculptor Wall. This “wall”, which is a large diffuse structure stretching across tens of millions of light years, contains thousands of galaxies and potentially a significant reservoir of the WHIM if the theoretical simulations are correct. The WHIM in the wall should absorb some of the X-rays from the AGN as they make their journey across intergalactic space to Earth.

Using new data from Chandra and previous observations with both Chandra and XMM-Newton, absorption of X-rays by oxygen atoms in the WHIM has clearly been detected by Fang and his colleagues. The characteristics of the absorption are consistent with the distance of the Sculptor Wall as well as the predicted temperature and density of the WHIM. This result gives scientists confidence that the WHIM will also be found in other large-scale structures.

Several previous claimed detections of the hot component of the WHIM have been controversial because the detections had been made with only one X-ray telescope and the statistical significance of many of the results had been questioned.

“Having good detections of the WHIM with two different telescopes is really a big deal,” said co-author David Buote, also from the University of California at Irvine. “This gives us a lot of confidence that we have truly found this missing matter.”

In addition to having corroborating data from both Chandra and XMM-Newton, the new study also removes another uncertainty from previous claims. Because the distance of the Sculptor Wall is already known, the statistical significance of the absorption detection is greatly enhanced over previous “blind” searches. These earlier searches attempted to find the WHIM by observing bright AGN at random directions on the sky, in the hope that their line of sight intersects a previously undiscovered large-scale structure.

Confirmed detections of the WHIM have been made difficult because of its extremely low density. Using observations and simulations, scientists calculate the WHIM has a density equivalent to only 6 protons per cubic meter. For comparison, the interstellar medium — the very diffuse gas in between stars in our galaxy — typically has about a million hydrogen atoms per cubic meter.

“Evidence for the WHIM has even been much harder to find than evidence for dark matter, which is invisible but can be detected because of its gravitational effects on stars and galaxies,” said Fang.

There have been important detections of possible WHIM in the nearby Universe with relatively low temperatures of about 100,000 degrees using ultraviolet observations and relatively high temperature WHIM of about 10 million degrees using observations of X-ray emission in galaxy clusters. However, these are expected to account for only a relatively small fraction of the WHIM. The X-ray absorption studies reported here probe temperatures of about a million degrees where most of the WHIM is predicted to be found.

These results appear in the May 10th issue of The Astrophysical Journal. NASA’s Marshall Space Flight Center in Huntsville, Ala., manages the Chandra program for NASA’s Science Mission Directorate in Washington. The Smithsonian Astrophysical Observatory controls Chandra’s science and flight operations from Cambridge, Mass.

Image Credit: Illustration: NASA/CXC/M.Weiss; Spectrum: NASA/CXC/Univ. of California Irvine/T. Fang et al.

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Galaxy Expels Supermassive Black Hole

Undergraduate student Marianne Heida of the University of Utrecht has found what appears to be a supermassive black hole leaving its home galaxy at high speed. As part of an international team of astronomers, this extraordinary discovery appears in a paper in the journal Monthly Notices of the Royal Astronomical Society.

For her final year project, Marianne worked at the SRON Netherlands Institute for Space Research, used the Chandra Source Catalog (made using the orbiting Chandra X-ray Observatory) to compare hundreds of thousands of sources of X-rays with the positions of millions of galaxies. Normally each galaxy contains a supermassive black hole at its center. The material that falls into black holes heats up dramatically on its final journey and often means that black holes are strong X-ray sources.

X-rays are also able to penetrate the dust and gas that obscures the center of a galaxy, giving astronomers a clear view of the region around the black hole, with the bright source appearing as a starlike point. Looking at one galaxy in the Catalog, Marianne noticed that the point of light was offset from the center and yet was so bright that it could well be associated with a supermassive black hole.

The black hole appears to be in the process of being expelled from its galaxy at high speed. Given that these objects can have masses equivalent to 1 billion Suns, it takes a special set of conditions to cause this to happen.

Marianne’s newly-discovered object is probably the result of the merger of two smaller black holes. Supercomputer models suggest that the larger black hole that results is shot out away at high speed, depending on the direction and speed in which the two black holes rotate before their collision. In any case, it provides a fascinating insight into the way in which supermassive black holes develop in the center of galaxies.

Marianne’s research ““ which was carried out under the supervision of SRON researcher Peter Jonker – suggests this discovery may be only the tip of the iceberg, with others subject to future confirmation using the Chandra Observatory. She comments: “We have found many more objects in this strange class of X-ray sources. With Chandra we should be able to make the accurate measurements we need to pinpoint them more precisely and identify their nature.”

Finding more recoiling black holes will provide a better understanding of the characteristics of black holes before they merge. In future, it might even be possible to observe this process with the planned LISA satellite, an instrument capable of measuring the gravity waves that the two merging black holes emit. Ultimately this information will let scientists know if supermassive black holes in the cores of galaxies really are the result of many lighter black holes merging together.

Image Caption: A Hubble Space Telescope image of the galaxy studied by Marianne Heida. The white circle marks the center of the galaxy and the red circle marks the position of the suspected offset black hole. Image: STScI / NASA

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Tiger Poachers To Face Harsher Prison Sentences

Tiger poachers in Bangladesh could soon face harsher prison sentences once new amendments to the existing poaching laws take effect, which is primarily aimed at protecting the critically endangered Bengal tiger, an official said on Monday.

The existing law, which dates back to 1974, sets the maximum penalty for poaching or smuggling to a fine of 30 US dollars (2,000 taka) and a two-year prison term. The current laws are too compassionate to preserve the country’s endangered big game populations, said the government’s top conservation official.

“We are now amending the law to fight poachers who have become increasingly sophisticated and are now often armed. They must be stopped,” Tapan Kumar Dey told AFP.

Dey said the government has prepared the new Bangladesh Wildlife Preservation Act. The new act could impose stiffer penalties on poachers, which include a maximum sentence of life in prison and a fine up to 4,500 US dollars (300,000 taka).

The law is expected to be approved later this month by the cabinet, and then be sent to parliament for final approval, Dey added.

The new law also boosts protection efforts for the nation’s ancient forests.

Bangladesh has seen more than 13 species go extinct in the past 40 years, according to the International Union for Conservation of Nature. More than 100 species are now endangered or critically endangered in the country.

During the same 40-year period, the human population has nearly tripled. The sharp increase in human populations also means more forest is being destroyed for human habitation. Current forest cover in Bangladesh is now only 10 percent of the land mass, which results in more frequent encounters between humans and animals, experts say.

Bengal tigers, which were once found all around the country 50 years ago, are now confined to the Sunderbans, the world’s largest mangrove forest. Experts warn that only 200 big cats are left in the wild, down more than 50% from 2004.

Poaching is the main threat to the endangered Bengal tiger, but mob beatings by villagers who have been traditionally hostile to the tigers also are contributing to the decline.

New Video Streaming Technology Being Developed

The Wi-Fi Alliance is adopting a new technology that should boost data speeds of over 10 times at short distances, which could replace video cables in the home entertainment center.

The industry group that supports Wi-Fi said it is joining with Wireless Gigabit Alliance, or WiGig, which has been developing ways to exploit the 60-gigahertz frequency band for extremely high data speeds between devices in the same room.

Wi-Fi Alliance marketing director Kelley Davis-Felner told the Associated Press (AP) the technology would probably take two years in order to show up in products.  The first ones might be Blu-Ray players that send their high-definition video signal wirelessly to compatible TV sets. Portable devices like video cameras could later have the ability to send video wirelessly.

WirelessHD Consortium, a separate group, has developed technology to exploit the same frequency band with the same goals.  Wireless HD is further along in the development.  It uses paired transmitters and receivers for HD video that came out last year.  The focus of the group was originally more narrow-minded, just looking at video and audio, but it has recently expanded to include data networking.

John Marshall, chairman of the WirelessHD Consortium, told AP that its technology is more suitable for high-quality video streaming, and less suitable for use in portable devices.

It is possible the technologies will coexist.  Several electronic industry leaders are members of both groups, including Intel Corp., Samsung Electronics Co, Panasonic Corp. and Toshiba Corp.

It is possible to carry video on today’s Wi-Fi bands, 2.4 GHz and 5 GHz.  That is a cheaper option with longer range, but the video quality is slightly degraded and there is a slight transmission delay.

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Thesis: New Treatment Method In Sight In Cardiac Surgery

A joint clinical trial conducted by the University Hospital and the University of Gothenburg, Sweden, found that an element in human blood, fibrinogen, is likely more vital to the blood’s clotting ability in connection with heart surgery than previously considered. If the patients also receive a dose of fibrinogen prior to the procedure, this reduces the risk of hemorrhage during and after surgery. These results may open the door to new strategies in reducing bleeding complications in cardiac surgery.

Each year over 7,000 Swedes undergo open-heart surgery, most commonly a coronary artery bypass or a valve replacement. It’s a major procedure during which the heart and lungs are stopped and their functions are temporarily replaced by a heart-lung machine, or CPB pump.

“But the use of a CPB pump has negative effects on the blood’s clotting ability, and those effects last a few hours after the operation,” says Dr Martin Karlsson at Sahlgrenska Academy at the University of Gothenburg, author of the thesis. “This leads to a risk of bleeding. It’s unclear why certain patients have more problems than others, but several factors may be involved.”

Fibrinogen is one of the most important coagulation proteins in our blood, and the thesis shows that the amount of fibrinogen in the blood is more important than previously thought to ensure clotting after heart surgery.

“We found that the amount of fibrinogen in the patient’s blood immediately prior to bypass surgery is directly related to how much the patient bleeds afterwards, and also to the need for blood transfusions after surgery. As a rule, patients with lower levels of fibrinogen in their blood prior to surgery bleed more, even if they have levels that were previously perceived as normal and sufficient.”

In one part of the trial, bypass patients with low levels of natural fibrinogen in their blood were pre-treated with fibrinogen concentrate before the operation. This reduced the amount of bleeding and the need for transfusions during and after surgery compared with a control group, and the pre-treated patients showed no signs of side effects.

“Treatments such as this have never been tried on patients before, and this trial was only a pilot study, with a small number of patients,” Karlsson explains. “So it’s too early to draw any real conclusions, but the results are promising and larger trials have already begun.”

Karlsson hopes that if the results of the pilot study can be confirmed, then fibrinogen concentrate could be used as a preventive therapy for patients about to undergo a surgical procedure and in other instances where the risk of hemorrhage is high. This would offer a new treatment option for the large number of patients undergoing cardiac surgery each year, possibly also for other surgical procedures.

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New Genes Involved In Human Eye Color Identified

Three new genetic loci have been identified with involvement in subtle and quantitative variation of human eye color. The study, led by Manfred Kayser of the Erasmus University Medical Center Rotterdam, The Netherlands, was published May 6 in the open-access journal PLoS Genetics.

Previous studies on the genetics of human eye color used broadly-categorized trait information such as ‘blue’, ‘green’, and ‘brown’; however, variation in eye color exists in a continuous grading from the lightest blue to the darkest brown. In this genome-wide association study, the eye color of about 6000 Dutch Europeans from the Rotterdam Study was digitally quantified using high-resolution full-eye photographs. This quantitative approach, which is cost-effective, portable, and time efficient, revealed that human eye color varies along more dimensions than are represented by the color categories used previously.

The researchers identified three new loci significantly associated with quantitative eye color. One of these, the LYST gene, was previously considered a pigmentation gene in mice and cattle, whereas the other two had no previous association with pigmentation.

These three genes, together with previously identified ones, explained over 50% of eye color variance, representing the highest accuracy achieved so far in genomic prediction of complex and quantitative human traits.

“These findings are also of relevance for future forensic applications”, said Kayser, “where appearance prediction from biological material found at crime scenes may provide investigative leads to trace unknown persons”.

FINANCIAL DISCLOSURE: The Rotterdam Study authors acknowledge funding from the Netherlands Genomics Initiative (NGI) and Netherlands Organization for Scientific Research (NWO) (nr. 050-060-810) within the framework of the Forensic Genomics Consortium Netherlands (FGCN), the Netherlands Forensic Institute and the Research Institute for Diseases in the Elderly (RIDE) (nr. 014-93-015). The generation and management of GWAS genotype data for the Rotterdam Study (RS-I, RS-II) was supported by a NWO investments grant (nr. 175.010.2005.011, 911-03-012). The Rotterdam Study is funded by the Erasmus University Medical Center, Erasmus University Rotterdam; the Netherlands Organization for the Health Research and Development (ZonMw); the RIDE; the Ministry of Education, Culture, and Science; the Ministry for Health, Welfare, and Sports of the Netherlands; the European Commission (DG XII); and the Municipality of Rotterdam. The ophthalmic part of the Rotterdam Study was supported by Lijf en Leven, Krimpen, and Lek; MD Fonds, Utrecht. Oogfonds Nederland, Utrecht; Stichting Nederlands Oogheelkundig Onderzoek, Nijmegen, Rotterdam; Swart van Essen, Rotterdam; NWO; Bevordering van Volkskracht, Rotterdam; Blindenhulp, The Hague; Rotterdamse Vereniging Blindenbelangen, Rotterdam; OOG, The Hague; Algemene Nederlandse Vereniging ter Voorkoming van Blindheid, Doorn; Blinden-Penning, Amsterdam; Blindenhulp, Gravenzande; Henkes Stichting, Rotterdam; Topcon Europe BV, Capelle aan de IJssel; Medical Workshop BV, Groningen (all in the Netherlands); as well as Heidelberg Engineering, Dossenheim, Germany. The TwinsUK authors acknowledge funding from the Wellcome Trust, the EU MyEuropia Marie Curie Research Training Network, Guide Dogs for the Blind Association the European Community’s Seventh Framework Program (FP7 2007-2013)/grant agreement HEALTH-F2-2008-201865-GEFOS and (FP7 2007-2013), ENGAGE project grant agreement HEALTH-F4-2007-201413, and the FP-5 GenomEUtwin Project (QLG2-CT-2002-01254). The study also receives support from the Department of Health via the National Institute for Health Research (NIHR) comprehensive Biomedical Research Centre award to Guys St Thomas NHS Foundation Trust in partnership with Kings College London. TDS is an NIHR senior Investigator and CJH an NIHR Senior Research Fellow. The project also received support from a Biotechnology and Biological Sciences Research Council (BBSRC) project grant (G20234). The authors acknowledge the funding and support of the National Institutes of Health(NIH) National Eye Institute grant 1RO1EY018246, and the NIH Center for Inherited Diseases Research (CIDR) (PI: Terri Young). The BTNS authors acknowledge funding from the Australian National Health and Medical Research Council (NHMRC, grants 241944, 339462, 389927, 389875, 389891, 389892, 389938, 443036, 442915, 442981, 496739, 552485, 552498), Australian Research Council (A7960034, A79906588, A79801419, DP0212016, DP0343921); National Institutes of Health National Cancer Institute (CA88363). DLD and GWM were supported by the NHMRC Fellowships scheme. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

COMPETING INTERESTS: The authors have declared that no competing interests exist.

CITATION: Liu F, Wollstein A, Hysi PG, Ankra-Badu GA, Spector TD, et al. (2010) Digital Quantification of Human Eye Color Highlights Genetic Association of Three New Loci. PLoS Genet 6(5): e1000934. doi:10.1371/journal.pgen.1000934

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Arteries May Suffering Insulin Resistance

In people with insulin resistance or full-blown diabetes, an inability to keep blood sugar levels under control isn’t the only problem by far. A new report in the May issue of Cell Metabolism, a Cell Press publication, shows that our arteries suffer the effects of insulin resistance, too, just for entirely different reasons.

“We think about insulin resistance in liver, muscle, and fat, but insulin also works on vascular cells,” said Christian Rask-Madsen of the Joslin Diabetes Center in Boston.

And what insulin does in our arteries sends a signal that helps prevent the buildup of fatty plaques that can cause arteries to harden, new research in mice shows.

Earlier studies showed that in the context of systemic insulin resistance, blood vessels become resistant, too. Doctors also knew that insulin resistance and the high insulin levels to which it leads are independent risk factors for vascular disease. But it wasn’t clear if arteries become diseased because they can’t respond to insulin or because they get exposed to too much of it.

Now comes evidence in favor of the former explanation. Rask-Madsen along with George King and their colleagues find that mice prone to atherosclerosis fare much worse when the linings of their arteries can’t respond to insulin. The animals’ insulin-resistant arteries develop plaques that are twice the size of those on normal arteries.

Insulin-resistant blood vessels don’t open up as well, and levels of a protein known as VCAM-1 go up in them, too.

VCAM-1 belongs to a family of adhesion molecules, Rask-Madsen explained. “It sits on the endothelium and binds white blood cells.” Those cells can enter the artery wall, where they start taking up cholesterol, and an early plaque is born.

“The results provide definitive evidence that loss of insulin signaling in the endothelium, in the absence of competing systemic risk factors, accelerates atherosclerosis,” the researchers conclude.

The findings should come as good news to those on insulin therapy, since they suggest the hormone itself should not cause harm to arteries, as some had feared. “If anything, it should be beneficial in preventing atherosclerosis,” Rask-Madsen said.

The results also suggest drugs specifically designed to treat insulin resistance in the vasculature might prevent cardiovascular complications in people with insulin resistance or type 2 diabetes, the researchers say.

While the researchers emphasize that it will remain critical to keep blood sugar in check with more traditional therapies, new treatments aimed at blood vessels could mean big gains for those with diabetes. After all, atherosclerosis is responsible for many of diabetes’ worst complications””heart disease, stroke, and leg amputations among them.

“Atherosclerosis is the main reason for shorter life spans in diabetes patients,” Rask-Madsen said.

The researchers include Christian Rask-Madsen, Joslin Diabetes Center, Boston, MA; Qian Li, Joslin Diabetes Center, Boston, MA; Bryn Freund, Temple University School of Medicine, Philadelphia, PA; Danielle Feather, Temple University School of Medicine, Philadelphia, PA; Roman Abramov, Joslin Diabetes Center, Boston, MA; I-Hsien Wu, Joslin Diabetes Center, Boston, MA; Kai Chen, Joslin Diabetes Center, Boston, MA; Junko Yamamoto-Hiraoka, Joslin Diabetes Center, Boston, MA; Jan Goldenbogen, Joslin Diabetes Center, Boston, MA; Konstantinos B. Sotiropoulos, Joslin Diabetes Center, Boston, MA; Allen Clermont, Joslin Diabetes Center, Boston, MA; Pedro Geraldes, Joslin Diabetes Center, Boston, MA; Claudia Dall’Osso, Joslin Diabetes Center, Boston, MA; Amy J. Wagers, Joslin Diabetes Center, Boston, MA; Paul L. Huang, Massachusetts General Hospital, Boston, MA; Mark Rekhter, Lilly Research Laboratories, Indianapolis, IN; Rosario Scalia, Temple University School of Medicine, Philadelphia, PA; C. Ronald Kahn, Joslin Diabetes Center, Boston, MA; and George L. King.

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Darwin’s Research on Emotion

Historical research by Peter J. Snyder, PhD, reveals more of Charles Darwin’s thinking when he completed what may be the first example of a prospective “single-blind” study of human perception of emotional expression. Through scrutiny of Darwin’s work, including previously unpublished handwritten notes on his experiments, Snyder explains how this early experiment has direct implications to current work today in the areas of schizophrenia, autism spectrum disorders and other neuropsychiatric conditions. The paper is published in the Volume 19, Issue 2, 2010 of the Journal of the History of the Neurosciences.

Charles Darwin is well-known for his pioneering theory of evolution, but far less is known about some of his later work, such as delving into experimental psychology. While researching his book, The Expression of the Emotions in Man and Animals (1872), Darwin corresponded with a French neurologist, G.B.A. Duchenne. Duchenne conducted experiments on human facial expression of emotion by applying electrical stimulation directly to facial muscles. He produced a set of 65 photographic plates to show his belief that there are different muscles in the face that are responsible for every single, discrete emotion.

Darwin studied Duchenne’s work closely and doubted this view. He believed there was a smaller set core of emotions commonly expressed cross-culturally. As a result, Darwin designed and conducted a truly novel scientific test of Duchenne’s claim in what may be the first ever single-blind study of the recognition of human facial expression of emotion.

Snyder, who is vice president of research for Lifespan, began an in-depth study of this experiment and relied on what is believed to be previously unpublished notes recorded by Darwin with the help of his wife, Emma.

Snyder says, “No one in history has done more to shape modern biological science. After finding these handwritten tables in the Cambridge University Library (with the assistance of staff from the Darwin Correspondence Project), I found it to be a phenomenal experience to find something new and remarkable in Darwin’s work.” Snyder continues, “Darwin is certainly not one of the first who come to mind when we think of human experimental psychology, but here is proof of the tremendous impact he has had upon our current work and thinking.”

Snyder, who is also professor of neurology at The Warren Alpert Medical School of Brown University, explains that Darwin designed an “experiment” that he conducted at his home, during which he showed a selection of Duchenne’s photographic plates to 24 guests. To determine which of the plates to include in his book, Darwin initially chose 11 of the plates and listed them in a data table, which Snyder uncovered in the Cambridge Library. Darwin then showed those images without identifying titles to his guests and asked them to describe the emotion represented in each photographic image.

Snyder says, “As far as we are aware, the images of these three data tables from Darwin’s experiment are being reprinted in this paper for the first time. The markings in the tables tell us that he started to tabulate the results of his ‘subjects’ to determine the fewest number of the 11 plates that were associated with the most agreement with respect to the identification of the emotion being displayed.” Snyder’s research sought to determine, specifically, which of the original 65 plates in the larger Duchenne folio he specifically chose as the 11 stimuli in his experiment. “We can only surmise which plates he chose based on his own labels for these images, reflected on the y-axis of the data tables, and by relating this information to specific mention of this experiment in Expression and his actual selection of the woodcut reproductions of the original photographic plates found in the first edition.”

Recognition of emotion, and tests for it, serve as a proxy for “social cognition” — the accurate and rapid recognition of emotion in human faces — have been shown repeatedly to be compromised in a variety of psychiatric diseases. “This single and very novel psychological experiment is a little-known forerunner for an entire modern field of study with contemporary clinical relevance,” says Snyder. Darwin’s specific questions regarding the cardinal human emotions remain an actively studied topic today, with the intent of identifying novel biomarkers to promote and assist in the development of new therapies for the treatment of schizophrenia, autism and other neuropsychiatric diseases. Snyder notes, “Just over the past three years, we have designed and validated a facial recognition of emotion test that has been used in multiple drug trials, and is essentially the same paradigm pioneered by Darwin in the late 1860’s and early 1870’s.” As Snyder says, “The core skills or abilities required for successful completion of our tests today differ very little from that small experiment conducted by Darwin at his home in England approximately 140 years ago.

“Charles Darwin provided the evidence and model that forms the cornerstone of modern biology, as well as the framework by which we place advances in genetics and molecular biomedicine into context. Far less known is his unique contribution to experimental psychology and the beginnings of a line of enquiry that is being used today in the discovery of novel therapeutics for the treatment of several devastating human disorders, including autism spectrum and schizophrenia. I, for one, continue to remain in awe of Darwin’s contributions,” Snyder comments.

Other researchers who worked with Snyder include Rebecca Kaufman of the department of neuroscience at Brown University; John Harrison, PhD, division of neurosciences and mental health at the Imperial College of London, UK, and CogState, Ltd., in Melbourne, Victoria, Australia; and Paul Maruff, PhD, centre for neuroscience, University of Melbourne and CogState, Ltd., Melbourne, Victoria, Australia.

Image 2: Peter Snyder, Ph.D., vice president of research for Lifespan, shows Charles Darwin’s work involving the recognition of emotional expression may be the first example of a prospective single-blind study in this area, and has direct implications to current work today in the areas of schizophrenia, autism spectrum disorder and other neuropsychiatric conditions. “No one in the past 500 years has done more to shape modern biological science,” Snyder says. Credit: Lifespan

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Researchers Use New Microscope To ‘See’ Atoms For The First Time

Cryo-electron microscopy images shed light on virus structure, function

UCLA researchers report in the April 30 edition of the journal Cell that they have imaged a virus structure at a resolution high enough to effectively “see” atoms, the first published instance of imaging biological complexes at such a resolution.

The research team, led by Hong Zhou, UCLA professor of microbiology, immunology and molecular genetics, used cryo-electron microscopy to image the structure at 3.3 angstroms. An angstrom is the smallest recognized division of a chemical element and is about the distance between the two hydrogen atoms in a water molecule.

The study, the researchers say, demonstrates the great potential of cryo-electron microscopy, or Cryo-EM, for producing extremely high-resolution images of biological samples in their native environment.

“This is the first study to determine an atomic resolution structure through Cryo-EM alone,” said Xing Zhang, a postdoctoral candidate in Zhou’s group and lead author of the Cell paper. “By proving the effectiveness of this microscopy technique, we have opened the door to a wide variety of biological studies.”

With traditional light microscopy, a magnified image of a sample is viewed through a lens. Some samples, however, are too small to diffract visible light (in the 500 to 800 nm range, or 5,000 to 8,000 angstroms) and therefore cannot be seen. To image objects at the sub-500 nm scale, scientists must turn to other tools, such as atomic force microscopes, which use an atomically thin tip to generate an image by probing a surface, in much the same way a blind person reads by touching Braille lettering.

With electron microscopy, another sub-500 nm technology, a beam of electrons is fired at a sample, passing through empty areas and bouncing off dense areas. A digital camera reads the path of the electrons passing through the sample to create a two-dimensional projection image of the sample. By repeating this process at hundreds of different angles, a computer can construct a three-dimensional image of the sample at a very high resolution.

Zhou is faculty director of the Electron Imaging Center for Nanomachines (EICN) at UCLA’s California NanoSystems Institute, which is using cryo-electron microscopy to create 3-D reconstructions of nano-machineries, nano-devices and biological nano-structures, such as viruses.

Structurally accurate 3-D reconstructions of biological complexes are possible with cryo-electron microscopy because the samples are flash frozen, which allows them to be imaged in their native environment, and the microscope operates in a vacuum, because electrons travel better in that environment. The Cell paper focused on a structural study of the aquareovirus, a non-envelope virus that causes disease in fish and shellfish, in an effort to better understand how non-envelope viruses infect host cells.

“We are extremely excited about the recent breakthrough achieved by Hong Zhou and his team at the EICN lab,” said Leonard H. Rome, senior associate dean for research at the David Geffen School of Medicine at UCLA and associate director of the California NanoSystems Institute. “The ability to understand the structure of viruses at an atomic level will open avenues for manipulating them for use in drug delivery and propel numerous innovations in treatments of diseases. UCLA is fortunate to have such specialized instrumentation and the expertise of Professor Zhou and his team to take advantage of these marvelous microscopes.”

Viruses can be classed into two types: envelope and non-envelope. Envelope viruses, which include influenza and HIV, are surrounded by an envelope-like membrane which the virus uses to fuse with and infect a host cell. Non-envelope viruses lack this membrane and instead use a protein to fuse with and infect cells. This process was poorly understood until Zhou’s study.

“Through better knowledge of virus structures, we hope to engineer medications in three ways,” Zhou said. “If we understand how viruses work, first we can identify small molecules or drugs that block their infection; second, we can engineer ultra-stable and non-infectious virus-like particles as optimal vaccines; and third, we can alter their characteristics so that instead of delivering a disease, viruses could deliver medications.

“Indeed, we are working with UCLA physicians and engineers to engineer viruses for gene therapy and drug delivery,” he said. “In essence, we hope to take advantage of millions of years of evolution that have made viruses incredibly effective delivery platforms.”

From the high-resolution 3-D images produced with the cryo-electron microscopy, Zhou’s group was able to determine that the aquareovirus employs a priming stage to accomplish cell infection. In its dormant state, the virus has a protective protein covering, which it sheds during priming. Once the outer shell has been shed, the virus is in a primed state and is ready to use a protein called an “insertion finger” to infect a cell.

The team’s study ushers in a new era of structural biology for understanding important biological processes. The group was able to discover this functionality because of the accurate structural model produced through cryo-electron microscopy. In addition to producing a high-resolution 3-D image of samples, the technology allows samples to be imaged in their native environment, so the structural model is faithful to the original sample. From a technical point of view, this work also demonstrates the power of cryo-electron microscopy in obtaining 3-D structures of biological complexes without needing to grow a crystal.

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NIH Awards $10 Million To Rush University Medical Center To Develop Interventions To Address Health Disparities

Rush Center for Urban Health Equity will focus on disparities in heart and lung disease

Rush University Medical Center has been awarded a $10 million grant from the National Institutes of Health (NIH) to establish the Rush Center for Urban Health Equity. The aim of the Center is to find ways to promote changes to eliminate the disparities in heart and lung disease affecting inner city residents, in particular those who are low-income persons of color.

“Health disparities have persisted or worsened in the past two decades, despite efforts to narrow the gap. In Chicago alone, if the mortality rate for blacks was the same as for whites, then 4,000 fewer black people would die each year,” said Lynda H. Powell, PhD, the director of the Center and the chairperson of the Department of Preventive Medicine at Rush.  “We must find a way to change this situation.”

The Rush Center for Urban Health Equity is based on the principle that continued documentation of avoidable deaths and disabilities from health disparities in observational studies in insufficient. Instead, the Center is dedicated to preventing health disparities by conducting rigorous behavioral clinical trials and testing interventions across the spectrum from children to the elderly. These interventions, if effective, will have an immediate impact.

The first three research projects will focus on heart failure, depression, and pediatric asthma with co-morbid obesity.

A clinical trial led by Powell and Dr. James Calvin, director of the Section of Cardiology at Rush, aims to reduce repeated hospitalizations in low-income heart failure patients by improving doctor’s prescription of evidence-based medicine and patients’ adherence to the medicines that have been prescribed.

A second study, the BRIGHTEN Heart (Bridging Resources of a Geriatric Health Team via Electronic Networking ““ Heart) program will use “virtual” teams to coordinate care for older adults with co-morbid depression and metabolic syndrome. The study will be led by Dr. Steven Rothschild, associate center director and a family practice physician at Rush, and Erin Emery, PhD, director of Geriatric & Rehabilitation Psychology at Rush.

A third clinical trial is one of the first attempts to simultaneously control both asthma and obesity in high-risk children. The team, led by Dr. Molly Martin, a pediatrician and assistant professor in the Department of Preventive Medicine at Rush, has developed strong partnerships with local organizations in the Humboldt Park neighborhood with the aim of targeting the influences of schools, family and caregivers on weight and self-management of asthma.

Community partnerships are at the core of the Center’s vision and values. Residents will become active participants in the design and conduct of all of the interventions to improve their health.

“It’s critical to develop and conduct these programs in the community where people live in order to promote sustained change. Studies conducted at hospitals or research labs may produce short-term results, only to see those changes reversed when people return to the challenging environments within which they live,” said Rothschild.

The Center will involve a dynamic multi-disciplinary team representing basic and clinical research, cardiology, behavioral sciences, gerontology, endocrinology, epidemiology and pulmonary medicine to address risk a variety of levels of risk factors, including the community, family, social network, and individual psychology and risk behaviors.

“Efforts to isolate a single risk factor and to intervene on it alone have had only modest effectiveness.  Our Center has convened a group of medical and social science investigators and community residents to provide a multi-level approach to address the many simultaneous contributors to these disparities,” said Powell.

Unique to the Center is the involvement of a specialist in post-traumatic stress, Stevan Hobfoll, PhD, professor and chairperson of the Department of Behavioral Sciences at Rush.

Although research on health disparities has at times focused on major life stress, there has been relatively little focus on traumatic stress. Low income and ethnic minority populations are much more likely than higher income and majority population members to be exposed to traumatic stressors, such as murder, serious injury, sexual or physical assault.

“Major life and traumatic stressors may both indirectly affect physical health through their influence on behaviors, including drug and alcohol use, smoking, sleep disturbances, avoidance of exercise, as well has directly affect health by compromising the immune system or inflammatory responses,” said Hobfoll.

The Center will place a priority on training the next generation researchers who will foster health equity in the future. This will include supporting initiatives in Chicago Public Schools to promote health careers and progression to college programs with minority serving institutions such as Chicago State University and Malcolm X College.  Training fellowships and post-doctoral training will also be offered.

“Progress on health disparities has been slow in the United States. In fact, in Chicago black/white health disparities continue to get worse over time,” said Powell.  “We refuse to sit idly by and watch this happen. We want to eliminate the health disparities that are cutting short the lives and livelihoods of our family, friends, and neighbors.”

The Rush Center will be a designated Centers for Population Health and Health Disparities (CPHHD) program. The National Cancer Institute and the National Heart, Lung and Blood Institute and the Office of Behavioral and Social Sciences Research at the National Institutes of Health (NIH) are partnering to provide funds to continue the CPHHD program. This program responds to a strategic priority at the NIH to address disparities and inequities in the prevalence and outcomes of several diseases, particularly cancer and heart disease. The CPHHD program requires transdisciplinary research involving social, behavioral, biological, and genetic research to improve knowledge of the causes of health disparities and devise effective methods of preventing, diagnosing and treating disease and promoting health. For more information on the CPHHD program, visit http://cancercontrol.cancer.gov/populationhealthcenters/cphhd/

Early Childhood Experiences Have Lasting Emotional, Psychological Effects

Theme issue of Archives of Pediatrics & Adolescent Medicine highlights dangers during early development, interventions to improve long-term health

Experiences between birth and age 5 matter significantly to children’s long-term emotional and psychological health, and changing these experiences for the better pays dividends, according to an editorial and several new reports in the May issue of Archives of Pediatrics & Adolescent Medicine, one of the JAMA/Archives journals.

This month’s journal is a theme issue devoted to the science of early life experience. The articles provide “key, actionable evidence of how we can manipulate the early environment of children and make a tangible difference in their health,” write Dimitri A. Christakis, M.D., M.P.H., and Frederick P. Rivara, M.D., M.P.H., both of the University of Washington and Seattle Children’s Research Institute as well as associate editor and editor of the Archives, in the editorial.

“This research needs to be translated into action,” they continue. “In the new austerity that has been spawned by the national fiscal crisis, states are cutting back broadly on services. In many cases, children are being hit the hardest. Given the importance of early childhood experiences on the entire life course, we can only hope that the people who make decisions about where monies are saved are mindful of the effect those decisions can have.”

(Arch Pediatr Adolesc Med. 2010;164[5]:491-492)

Prenatal Nicotine, Antidepressant Exposure Associated With Childhood Difficulties

Children whose mothers smoked during pregnancy appear to have more sleep problems throughout the first 12 years of life, and those whose mothers took a certain type of antidepressant may be more likely to have some behavior problems at age 3, according to two reports in the theme issue.

In one study, Kristen C. Stone, Ph.D., of the Brown Center for the Study of Children at Risk, Women and Infants Hospital, Providence, R.I., and colleagues assessed 808 children whose mothers provided information about prenatal care, sociodemographics and their children’s sleep and behavior problems, as well as substance exposure during pregnancy.

Of the five substances assessed””cocaine, opiate, marijuana, alcohol and nicotine””only prenatal exposure to nicotine was associated with sleep problems in children. “Higher levels of prenatal nicotine exposure predicted more sleep problems, specifically difficulty falling and staying asleep from one month to 12 years,” the authors write.

“Targeting of this group of children for educational and behavioral efforts to prevent and treat sleep problems is merited given that good sleep may serve as a protective factor for other developmental outcomes,” they conclude.

In another report, Tim F. Oberlander, M.D., F.R.C.P.C., and colleagues at University of British Columbia, Vancouver, studied 75 mothers and their 3-year-old children. Of these, 33 mothers took selective serotonin reuptake inhibitors (SSRIs) during pregnancy and 42 did not. Mothers’ moods were assessed during the third trimester, three months after birth and at the three-year follow-up.

“Prenatal SSRI exposure and higher current maternal anxiety contributed to increased internalizing behaviors [withdrawal, anxiety and depression] in 3-year-old children,” the authors write. “Increased levels of externalizing behaviors were also observed, but they were associated with current levels of three-year postpartum maternal mood.” Genetic factors, including an altered version of a gene in the serotonin processing system, moderated the effect of a mothers’ mood on her child.

“Even with prenatal maternal SSRI treatment, mothers continue to be symptomatic, and child behavior at 3 years of age continues to be at risk,” the authors conclude.

In an editorial accompanying both papers, Gideon Koren, M.D., and Irena Nulman, M.D., of the Hospital for Sick Children, Toronto, write that “since the thalidomide era, there are concerns regarding potential adverse effects of drug and chemical exposure on the developing fetus in pregnancy, causing physicians and expectant mothers high levels of anxiety toward drugs, even in life-threatening conditions.”

“Because pregnant women will never be randomized to exposure to antidepressants or recreational drugs, high-quality observational investigations, such as those by Oberlander and colleagues and Stone and colleagues, will be critical in distinguishing associations from causation in the field of maternal-fetal toxicology,” they conclude.

(Arch Pediatr Adolesc Med. 2010;164[5]:452-456, 444-451, 494-495.)

Early Childhood Television Exposure Associated With Academic, Lifestyle Risks in Fourth Grade

Children who are exposed to more television at 29 months of age appear to have more problems in school and poorer health behaviors in fourth grade. Linda S. Pagani, Ph.D., of Universit© de Montr©al, Canada, and colleagues studied 1,314 children in this age group whose parents reported their weekly hours of television exposure.

The researchers assessed parent and teacher reports of the children’s academic, psychosocial and health behaviors as well as their body mass index (BMI) in fourth grade. Each additional hour of television in early childhood corresponded to a 7 percent unit decrease in classroom engagement, 6 percent unit decrease in math achievement, 10 percent unit increase in victimization by classmates, 13 percent unit decrease in time spent doing weekend physical activity, 9 percent unit decreases in activities involving physical effort, 9 percent higher scores for consumption of soft drinks and 10 percent higher scores for consumption of snacks, as well as a 5 percent unit increase in BMI.

“The long-term risks associated with higher levels of early exposure may chart developmental pathways toward unhealthy dispositions in adolescence,” the authors conclude. “A population-level understanding of such risks remains essential for promoting child development.”

(Arch Pediatr Adolesc Med. 2010;164[5]:425-431.)

Home Visits by Nurses Benefit Mothers, Children Through Age 12

Home visits by nurses during pregnancy and the child’s infancy appear to improve mothers’ life course, reduce some behavior problems in children and decrease government spending in aid programs through age 12, according to two reports in the theme issue.

In the first, Harriet J. Kitzman, R.N., Ph.D., of University of Rochester, N.Y., and colleagues studied 613 12-year-old children, 228 of whose mothers were randomly assigned to receive home visits by nurses during the prenatal period and until the child was age 2. The other mothers received prenatal care and developmental screening and referral for the children, but no home visits.

“Through age 12, the program reduced children’s use of substances and internalizing mental health problems and improved the academic achievement of children born to mothers with low psychological resources,” the authors write.

In the second paper, David L. Olds, PhD, University of Colorado Denver Anschutz Medical Campus, and colleagues assessed partner relationships, fertility, economic self-sufficiency and government spending among the mothers in the study. By the time the child was age 12, nurse-visited mothers as compared with control mothers reported less role impairment due to substance use (0 percent vs. 2.5 percent), longer partner relationships (59.6 months vs. 52.6 months) and a greater sense of mastery.

During the 12-year period, the government spent less through aid programs on nurse-visited families ($8,772 vs. $9,797); this represents $12,300 in discounted savings compared with the program cost of $11,511.

“In general, these findings support the effectiveness of the Nurse-Family Partnership,” the program providing the nurse visits, the authors write. “The partnership offers a means of reducing government spending and family poverty, improving children’s health and development and grounding policy based on the results of replicated randomized controlled trials.”

(Arch Pediatr Adolesc Med. 2010;164[5]:412-418, 419-424.)

Repetitive Movements Common in Children With a History of Institutional Care

Stereotypies””repetitive, unchanging movements with no obvious goal or function””appear common among children who have a history of early institutional care. Karen J. Bos, of Children’s Hospital Boston and Harvard Medical School, Boston, and colleagues studied 136 children from institutions in Bucharest, Romania.

After a baseline assessment, half of the children remained in their institutions, whereas the other half were assigned to be placed in foster care. At the initial assessment, more than 60 percent of children in institutional care exhibited stereotypies. At follow-up assessments 30 months, 42 months and 54 months later, children placed in foster care experienced a reduction in stereotypies, with earlier and longer placements resulting in larger reductions.

“Children who continue to exhibit stereotypies after foster care placement are significantly more impaired on outcomes of language and cognition than children without stereotypies and thus may be a target for further assessments or interventions,” the authors write. “These findings have implications beyond the unique population of children in orphanages, as the extreme example of institutional care can help us to better understand the impact of deprivation on children in many settings.”

(Arch Pediatr Adolesc Med. 2010;164[5]:406-411.)

Living With Birth Parents After Maltreatment Associated With Altered Cortisol Levels

Children who continue to live with their birth parents after the involvement of Child Protective Services appear to have different daily patterns in production of the stress hormone cortisol than do children who are placed in foster care. Kristin Bernard, M.A., and colleagues at the University of Delaware, Newark, studied 339 children at 2.9 to 31.4 months, 155 of whom were living with birth parents and 184 of whom were placed in foster care following an incident requiring the involvement of Child Protective Services.

The children’s salivary cortisol levels were measured at waking and bedtime on two days. Children who still lived with their parents had different patterns of cortisol production than those in foster care, with flatter slopes in waking to bedtime values.

“A blunted pattern of cortisol production appears to confer risk for later psychiatric disorders, most especially psychopathy and substance abuse problems,” the authors write. “Although it is premature to suggest specific implications for neglected children, the findings are concerning.”

“Foster care may have a regulating influence on children’s cortisol among children who have experienced maltreatment,” they conclude.

(Arch Pediatr Adolesc Med. 2010;164[5]:438-443.)

Editorial: Behavioral Interventions Should Target Caregiver Relationships

“We live in a universe where the disruptive behaviors so often exhibited by children in child welfare are easily ascribed to Diagnostic and Statistical Manual of Mental Disorders (Fourth Edition) diagnoses of attention-deficit, bipolar or oppositional defiant disorders,” write David Rubin, M.D., M.S.C.E., and Kathleen Noonan, J.D., of The Children’s Hospital of Philadelphia, in an accompanying editorial.

“Missing from that discussion is that at the heart of many of these disruptive behaviors are the biological effects of failed relationships, failed attachment and multiple traumatic disruptions,” they write. “The strength of the Bernard et al and Bos et al articles in this month’s Archives is that they demonstrate that such injuries produce neurobiological alterations whose treatment is more likely to be successful with interventions that target attachment failure than the symptoms of disruptive behaviors targeted by medications.”

“The work ahead is in understanding and supporting secure and functional caregiver relationships that lead to the sustained changes in the brain that will promote resiliency in children,” they conclude.

(Arch Pediatr Adolesc Med. 2010;164[5]:492-493.)

Twin With Higher Birth Weight Has More Conduct Problems

Among twin pairs in which there is a 20 percent or greater difference in birth weight, the twin who weighs more appears more likely to have conduct problems at age 3 to 4 years. David Mankuta, M.D., of Hadassah Hebrew University Hospital, Jerusalem, and colleagues identified 112 Israeli families with twins born at unequal weights in 2004 and 2005.

According to mothers’ reports, the twin with the higher birth weight had more conduct problems in 41 percent of twin pairs, whereas the twin with lower birth weight had more conduct problems in 21 percent of twin pairs. This association tended to be stronger in dizygotic (fraternal) vs. monozygotic (identical) twins.

“The findings suggest an effect of birth weight differences on development of subsequent conduct problems,” the authors write. “Further studies are needed to clarify the mediating factors of this effect.”

(Arch Pediatr Adolesc Med. 2010;164[5]:457-461.)

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ESA Preparing For Simulated Mars Mission

A group of volunteer astronauts are beginning their final round of training in preparation for a simulated mission to Mars that will last 520 days, according to Tuesday media reports.

In late May or early June, a team of three Russian, one Chinese, and a pair of European Space Agency (ESA) astronauts will be locked into a 1,000 square foot module near Moscow. The mission, which has been dubbed Mars500, was designed to simulate the journey from Earth to the Red Planet, and will help illustrate the possible physical and mental toll that it will take on the participants.

As part of the simulated mission, three members of the team will be quarantined to a module designed to mimic the Mars landing craft, while two others will be asked to explore a mock-up of the planet’s surface. They will spend eight hours of each day working, sleep for another eight hours, and have the rest of the day available for leisure time, according to Elise Menand of the AFP.

“The biggest risk of such an isolation is psychological,” Alexander Suvorov, the Institute for Biomedical Problems (IBMP) researcher in charge of the experiment, told Menand on May 3. “Of course relations between the crew will not always be harmonious, some will get on with others, others will not. But the priority is to be able to carry out tasks in spite of this.”

“Mars500 will be the first full-duration simulated mission to Mars, starting in a special facility in Moscow next summer,” the ESA website notes, adding that 250 days of the mission will simulate the journey to Mars, 30 days will simulate the surface exploration portion, and the remaining 240 days will simulate the return trip back to Earth.

Vital signs will be monitored throughout the mission, according to the ESA, and food rations for the missions will be provided. Furthermore, the agency notes, “Tasks performed by the crew will be comparable to those of the ISS [International Space Station] astronauts, but for a much longer time: maintenance, scientific experiments and daily exercise.”

“This mission might lack some of the glory and feeling of the real spaceflight, but it will be just as tough. The first humans to walk on Mars will surely remember these pioneers,” the website adds.

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US Scores Low On Motherhood Rankings

A charity group’s list has placed the United States at a meager 28th place on a list of the best countries in the world to be a mother, being shown up by many smaller and more underdeveloped countries.

The latest Save the Children “Mothers Index” placed Norway at the top of the list, followed by several other developed countries. Afghanistan ranked the worst, with several African states close behind.

Several poorer countries, including the Baltic states, Estonia, Latvia and Lithuania ranked higher than the United States. The European states of Croatia and Slovenia also ranked higher than the US.

One major factor in dragging the US ranking down is the maternal mortality rate. At 1 in 4,800, the US has one of the highest mortality rates in the developed world, according to the report.

“A woman in the Unites States is more than five times as likely as a woman in Bosnia and Herzegovina, Greece or Italy to die from pregnancy-related causes in her lifetime and her risk of maternal death is nearly 10-fold that of a woman in Ireland,” the report said.

The US also scored poorly with the under-five mortality with a rate of 1 in 125 births. “At this rate, a child in the US is more than twice as likely as a child in Finland, Iceland, Sweden or Singapore to die before his or her fifth birthday,” the report noted.

Other factors that have dragged the ranking down for the nation, are smaller numbers of children enrolled in preschool, and the US having the least generous maternity leave policy, which includes both in terms of duration and percent of wages paid. The US’s policy on maternity leave is lower than any wealthy nation.

The top five countries leading the way on the Save the Children list are: Norway, Australia, Iceland, Sweden and Denmark. Rounding out the top ten is New Zealand, Finland, the Netherlands, Belgium and Germany.

“While the situation in the United States needs to improve, mothers in the developing world are facing far greater risks to their own health and that of their children,” said Save the Children’s Mary Beth Powers.

“The shortage of skilled birth attendants and challenges in accessing birth control means that women in countries at the bottom of the list face the most pregnancies and the most risky birth situations, resulting in newborn and maternal deaths,” she told AFP.

The Mothers Index list was compiled after analyzing a number of factors affecting the health and well-being of women and children. The factors include access to healthcare, education and economic opportunities.

Norway took the top spot because women there are paid well, they have easy access to contraception and the country’s maternity leave policies are among the best in the world.

In underdeveloped and developing countries, funding for women’s and girl’s education needs top priority along with child health care, the report recommended.

The report called for governments in industrialized nations, including the United States, to work together to improve education and health for disadvantaged mothers and children.
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Novartis Working On Possible E. Coli Vaccine

Scientists at the Basel, Switzerland-based Novartis pharmaceutical company have uncovered components that they believe will help develop a vaccine that will protect people against E. coli bacterial infections in all of their forms.

The research, which was completed at a Novartis laboratory in Italy, centered around gene mapping of the Escherichia coli (E. coli) bacterium itself. Using the gene map, they were able to select a series of antigens to the disease-causing strains of E. coli, and discovered that nine of them were able to protect laboratory mice from infection with pathogenic bacteria.

While E. coli are typically found in most animals and in humans, certain strains of the bacteria can cause illness including urinary tract infection, blood poisoning, colitis, and neonatal meningitis. It often is associated with food-related illnesses, especially in infected meat or in fresh produce that has come in contact with manure.

However, Novartis’ discovery may mark the end of E. coli concerns.

“We know that we have the potential there, and this could mean that once you get vaccinated you could even be covered against all the different diseases that E. coli can cause,” MariaGrazia Pizza, a member of the company’s research team, told Kate Kelland of Reuters in a telephone interview.

She also told Kelland that experiments involving computer modeling and laboratory mice would continue, and that the first testing of the vaccine on humans could occur within the next two years.

“The development of such a vaccine will be very challenging for the company, but if we were successful at the end, obviously it would be a big thing,” Pizza concluded.

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Global Warming Splits Ugandan Ice Cap

According to Uganda’s Wildlife Authority (UWA), a split has occurred in an ice cap on Uganda’s highest peak as a result of global warming.

The split is on a glacier located in the Rwenzori mountain range, near the border with the Democratic Republic of Congo. It sits at an altitude of 16,736 feet and is blocking access to the Margherita summit, said authorities.

Margherita is Africa’s third highest peak and is a popular spot for climbers. Scientists say the glaciers in the Rwenzori range could disappear in the next 20 years because of global warming. Researchers said the ice cap is less than 0.7 square miles, nearly half the size it was 50 years ago.

A team employed by UWA had been sent to the mountain to evaluate how badly the split has affected passage to the summit.

The Rwenzori mountain range is one of the few regions near the equator to have glaciers. It was declared a Unesco World Heritage site in 1994.

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‘Smart Dust’ Could Become A Reality

When you think of “Ëœsmart dust”Ëœ, you might think of common house dust that perhaps grew a brain, but nothing could be farther from the truth.

Researcher Kristofer S. J. Pister dreamed up a futuristic vision in the 1990s that revolved around tiny sensors, no bigger than a grain of rice, that could be sprinkled around like dust or sand, and could monitor everything.

“Smart dust” particles, as Pister calls them, would act like electronic nerve endings for the planet. They would be fitted with computing power, sensing equipment, and wireless radios. The smart dust would make observations of the surrounding area and relay real-time data to a central computer.

Pister’s dream is now starting to become reality — in a sense.

“It’s exciting. It’s been a long time coming,” Pister, a computer professor at the University of California, Berkeley, told CNN News. “I coined the phrase 14 years ago. So smart dust has taken a while, but it’s finally here,” he added.

The technology, although not quite how Pister imagined it, is definitely upon us.

Hewlett-Packard recently announced it is working on a project it calls the “Central Nervous System for the Earth.” The computer printing company plans to release a trillion sensors all around the planet in the coming years.

According to HP, the wireless devices will monitor ecosystems, detect earthquakes more rapidly, predict traffic patterns and observe energy usage. The concept is that crises could be prevented and energy could be saved if people knew more about the planet in real time, instead of minutes, hours or days later.

HP is planning to take the first step in about two years, Pete Hartwell, a senior researcher at HP Labs in Palo Alto, told CNN.

HP has teamed up with Royal Dutch Shell — a petroleum corporation commonly known as Shell — to install a million matchbook-size monitors to aid in oil exploration by measuring rock vibrations and movement, said Hartwell.

The, sensors, which have already been deployed, will cover a 6-square-mile area, the largest smart dust deployment to date, Hartwell added. He said it is time to “take the technology out of the lab and into reality.”

The technology behind smart dust, introduced by Pister in 2001, has been around in science fiction since the 1960s with the release of “ËœThe Invincible’, a science fiction novel written in 1964 by Stanislaw Lem.

Despite the recent buzz, there is still much confusion in the computer industry as to what smart dust really is.

The sensors HP has developed and deployed are much larger and clunkier than actual flecks of dust. The sensors are much like the ones you find in the iPhone, but are 1,000 times more powerful, and are about the size of matchbooks. When enclosed in a metal box for protection, they are the size of a VHS tape.

You may wonder what the different is between a dust sensor and a traffic monitor or weather station.

Size for one. Smart dust sensors need to be quite small and portable to be efficient. But technology hasn’t evolved enough to make them on the scale of millimeters yet.

Another difference is wireless connectivity. Most building weather gauges are hard-wired. A sensor could gauge weather phenomenon, and be able to communicate wirelessly with the internet and with other sensors, making them far more efficient monitors.

What really counts though is the sheer number of sensors in a particular network, that differentiates the smart dust project from other data recorders around the world, Deborah Estrin, professor of computer science at the University of California, Los Angeles, tolf CNN.

Some experts say that reality has wandered so far from the smart dust concept that it is time to move on to new terminology of what the technology really is. Some terms floating about are “wireless sensor networks” or “meshes” that have generally been more accepted with researchers.

Estrin said that the idea behind smart dust sensors being disposable should be avoided. Sensors need to be designed for specific functions and spread out in a well-planned fashion — not scattered in the wind, which was the original concept of smart dust.

Despite differences, researchers are excited that smart dust theory that monitors everything could benefit humanity exponentially, and the idea behind it has remained fundamentally the same.

Wireless sensors are being employed by several real-world projects that aim to take the Earth’s vital signs.

Currently, wireless sensors monitor factories, farms, bridges, and other areas to promote efficiency and understanding of how these systems work, researchers expressed.

Sensor networks are employed, and deployed, for specific purposes.

For instance, a company called Streetline has installed 12,000 sensors in parking lot spaces and highways in San Francisco. The sensor in a parking space detects whether or not a vehicle is sitting in the space. Eventually, the data will be used for commuters to figure out where they can park, said Tod Dykstra, Streetline’s CEO.

Sensors are also used in factories and oil refineries to monitor machines for issues that can be taken care of before they cause serious trouble.

Sensors can be used also to pick up sound. Tiny cameras can be installed on the sensors to detect the presence of vehicles or people.

David Culler, a computer science professor at UC Berkeley, told CNN that the power of these sensor networks is that they can be connected. The development of the wireless sensor is comparable to the creation of the World Wide Web. What is being created with the smart dust idea is “Real World Web,” he said.

One major issue that most people will most likely have with smart dust technology is that even though the sensors are being deployed for science purposes, people may still get the Big Brother feeling — an uncomfortable sense that their lives are under constant, secret surveillance.

“It’s a very, very, very huge potential privacy invasion because we’re talking about very, very small sensors that can be undetectable, effectively,” said Lee Tien, an attorney for the privacy advocate Electronic Frontier Foundation.

“They are there in such numbers that you really can’t do anything about them in terms of easy countermeasures,” Tien told CNN. Of course this doesn’t mean scientists and researchers should stop using smart dust technology, but rather be mindful of privacy of others as the work continues.

Pister said that wireless frequencies that smart dust sensors use to communicate have security features built into them. So the data is public only if the person or company that installed the sensor wants it to be, he remarked.

He continued to say that there are clearly security and privacy concerns. “The good news is that when the radio technology was being developed for this stuff, it was shortly after all of the big concerns about Wi-Fi security. … We’ve got all the security tools we need underneath to make this information private.”

Privacy concerns would most likely escalate if one vision for smart dust technology becomes reality. Some researchers are looking into turning mobile phones into sensors. In this case, billions of people using cellphones around the world would become the “smart dust”.

Advocates for smart dust technology, and more so researchers, say the theory of monitoring the world would benefit people and the environment.

According to Pister, more information is better information.

“Having more sensors improves the efficiency of a system and reduces the demand and reduces waste,” he said. “So all of that is just straight goodness.”

Hartwell says the only way people can fight huge problems in the world such as climate change and biodiversity loss is to have more information about what is going on. “Frankly, I think we have to do it, from a sustainability and environmental standpoint,” he said.

Hartwell says while the initial use of HP’s “Central Nervous System for the Earth” project will be commercial, the motives behind the technology are selfless. “People ask me what my job is, and I say, well, I’m going to save the world,” he said.

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Mother, Daughter Morning Sickness Link Found

Norwegian researchers say that pregnant women are three times more likely to suffer from severe morning sickness if their mothers did.

About 2 percent of women suffer from excessive nausea and vomiting in pregnancy, which can require hospital treatment.

However, a study of 2.3 million births showed threefold higher numbers if mothers had moms that suffered the same condition.

Experts said the results might help women better understand their risk.

Hyperemesis is an excessive sickness that starts before the 22nd week of pregnancy, which can lead to dehydration and weight loss.

This is the most common cause of admission to hospital in early pregnancy and can lead to low birth weight and premature birth.

Previous studies have attributed the condition to “psychological causes,” according to the researchers.

The researchers analyzed birth records from 1967 to 2006, which included information on pregnancy complications.

The study found that daughters of women who had the condition during their pregnancy had a 3 percent higher risk, compared with 1 percent in those whose mothers did not have it.

However, there was no increased risk to the female partners of sons that had mothers with previous conditions.

The team said that even though the results found a genetic link between mothers and daughters, it is also possible there are lifestyle or environmental factors that are shared between mothers and daughters that increase the risk.

The researchers said the study “shed a new light” on the causes of hyperemesis in pregnancy.

“It might lead to a better appreciation of the underlying biology,” they added.

Catherine Nelson-Piercy, a consultant obstetric physician at Guy’s and St. Thomas’ Foundation Trust in London, told BBC News that clinicians might benefit from a better understanding of the genetic risks of hyperemesis when counseling women about the risk of recurrence in future pregnancies.

She said most women were under-treated due to the legacy of thalidomide, despite the availability of safe drugs.  Thalidomide is a drug given for morning sickness in the 1960s that caused birth defects.

“It can be extremely debilitating, women can’t work, can’t look after their families and they need to be admitted to hospital,” Piercy told BBC.

“It is safe to take anti-sickness drugs and it’s better for the baby and the pregnancy to treat this condition than let the woman get very severely ill and risk complications.”

The spokesman for the Royal College of Obstetrics and Gynecology, Patrick O’Brien, said the study showed growing evidence that many conditions in pregnancy, like diabetes or high blood pressure, were linked to a “genetic predisposition.”

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Doctors Find First symptoms Of Psychosis In 12-year-olds

Children normally experience flights of fancy, including imaginary friends and conversations with stuffed animals, but some of them are also having hallucinations and delusions which might be the early signs of psychosis.

A study of British 12-year-olds that asked whether they had ever seen things or heard voices that weren’t really there, and then asked careful follow-up questions, has found that nearly 6 percent may be showing at least one definite symptom of psychosis.

The children who exhibited these symptoms had many of the same risk factors that are known to correlate with adult schizophrenia, including genetic, social, neurodevelopmental, home-rearing and behavioral risks.

“We don’t want to be unduly alarmist, but this is also not something to dismiss,” said co-author Terrie Moffitt, the Knut Schmidt Nielsen professor of psychology and neuroscience and psychiatry & behavioral sciences at Duke University. The study appears in the April issue of Archives of General Psychiatry.

The children were participants in the long-term Environmental Risk Longitudinal Twin Study in Britain, which includes 2,232 children who have been tracked since age 5 and reassessed at 7, 10 and 12.

The British study is an outgrowth of research that the same group did earlier with a long-term cohort in Dunedin, New Zealand. At age 11, those children were asked about psychotic symptoms, but the researchers waited 15 years to see how, as adults, their symptoms matched what they reported at 11. By age 26, half of the people who self-reported symptoms at age 11 were found to be psychotic as adults.

“It looks like a non-trivial minority of children report these symptoms,” said co-author Avshalom Caspi, the Edward M. Arnett professor of psychology and neuroscience and psychiatry & behavioral sciences at Duke.

The findings provide more clues to the development of schizophrenia, but don’t solve any questions by themselves, said co-author Richard Keefe, director of the schizophrenia research group in the department of psychiatry and behavioral sciences at Duke.

Schizophrenia often goes undetected until adolescence, when the first overt symptoms ““ antisocial behavior, self-harm, delusions ““ begin to manifest in an obvious way. But nobody knows whether the disease is triggered by the process of adolescence itself, or brain development or hormone changes. “It’s my impression that all of those things interact,” Keefe said.

Psychotic symptoms in childhood also can be a marker of impaired developmental processes, and are something caregivers should look for, Moffitt said. “There is not much you can do except monitoring and surveillance,” Moffitt said. “But we feel we should be alerting clinicians that there’s a minority to pay attention to.”

While the incidence of psychotic symptoms in this study was around 5 or 6 percent, the adult incidence of schizophrenia is believed to be about 1 percent, Keefe added. There are some recent findings however, that many more people experience hallucinations and delusions without being diagnosed as psychotic, he said.

The research was supported by the U.S. National Institutes of Health, UK Medical Research Council, The National Alliance of Research on Schizophrenia and Depression, the Health Research Board of Ireland and the William T. Grant Foundation.

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The Role Of Human Behavior In Infectious Disease Emergence

After studying the interactions of human and animal populations in Africa, Kathleen Alexander, associate professor of wildlife science in Virginia Tech’s College of Natural Resources, found powerful evidence of how human behavior can influence the emergence of infectious disease in humans and animals.

Although human behavior is frequently cited as a factor that influences disease emergence events, most behavioral research has focused on the pathogen, the reservoir hosts (animals populations that maintain the pathogen in the environment), or the vectors (agents that transmit pathogens from host to host) of infectious disease. To demonstrate the relationship between human behavior and pathogen emergence, Alexander (http://www.fishwild.vt.edu/faculty/alexander.htm) examined how different human behaviors influence disease transmission between domestic dogs and the African wild dog, an endangered species, in Kenya and Botswana. In Africa, the domestic dog is thought to be the primary source of canine diseases leading to the decline of African wild dog populations.

In the journal article, “Human behavior influences infectious disease emergence at the human-animal interface,” (http://www.esajournals.org/doi/pdf/10.1890/090057) published in the Ecological Society of America’s Frontiers in Ecology and the Environment (http://www.frontiersinecology.org/), Alexander explains the significant differences in ranging behavior that she found in domestic dogs in Kenya and Botswana, which parallel the differences in disease-related mortality in African wild dog populations. The majority of domestic dogs in Kenya spend the day with grazing cattle, accompanied by herders, whereas in Botswana, most domestic dogs remain in the village, since cattle are normally left to graze unattended. As a result, African wild dogs have much higher disease mortality rates in Kenya, where they have more contact with domestic dogs.

These range differences in domestic dogs are associated with animal husbandry practices that vary between cultures. Using this investigation and similar cases in which human culture has influenced disease emergence, Alexander illustrates the implications of human behavior on infectious disease research and control, and explains how some animal illnesses can be spread to humans. “By promoting infectious disease emergence, human behavior may be the key that unlocks the proverbial Pandora’s Box, allowing infectious diseases to emerge,” Alexander remarked.

“We are increasingly seeing the threat that zoonotic disease emergence [animal diseases that can be passed to humans] poses to human health. One of the key drivers of emerging infectious disease is human behavior. What people do and how they do it in their environment will strongly shape the risk of pathogen exposure,” Alexander said. “We need to better understand human culture and behavior in this context so we are better able to predict where the next pandemic might begin. At present, we can only wait for the next outbreak.”

Alexander is working closely with CARACAL (http://www.caracal.info/) “” the Centre for Conservation of African Resources: Animals, Communities, and Land Use “” on environmental matters in Botswana, ranging from community conflict with wildlife to the health of wildlife and people living in the area.

The College of Natural Resources (http://www.cnr.vt.edu/) at Virginia Tech consistently ranks among the top three programs of its kind in the nation. Faculty members stress both the technical and human elements of natural resources and instill in students a sense of stewardship and land-use ethics. Areas of studies include environmental resource management, fisheries and wildlife sciences, forestry, geospatial and environmental analysis, natural resource recreation, urban forestry, wood science and forest products, geography, and international development. Virginia Tech, the most comprehensive university in Virginia, is dedicated to quality, innovation, and results to the commonwealth, the nation, and the world.

Image Caption: Virginia Tech wildlife scientist Kathleen Alexander examined how human behavior influences disease transmission between domestic and wild dogs in Africa. Credit: Courtesy of the Virginia Tech College of Natural Resources

Climate Change Will Speed Spread Of Invasive Fish To Northern Europe

Spanish and French researchers have evaluated the spread of the invasive mosquitofish Gambusia holbrooki, which is native to the United States and lives in Mediterranean rivers in Spain and France. The scientists warn that climate change will extend the current distribution area of this and other invasive species to the north.

The scientists at the University of Girona (UG) who coordinated this study say it is important to understand the interaction between climate change and invasive species. To this end, they have assessed the impact of geographical latitude on the vital features of Gambusia holbrooki and its rate of parasitic infestation in Europe.

“This study shows that temperature affects the abundance of this species, its reproduction and other characteristics of its life cycle”, Emili García-Berthou, lead author of the study and a researcher at the UG’s Institute of Aquatic Ecology, tells SINC.

The results, published recently in the journal Biological Invasions, show that gambusia is more abundant in its southern populations, where its reproductive effort is greater than in more northerly populations, meaning that this invasive species originating in the United States shows a “clear latitudinal variation in its life cycle and invasive success”.

The author says it is “likely that climate change will enable this species to expand to areas further north than its current distribution area”.

“Over a latitudinal gradient of more than 5º, the abundance of this species in river mouths varies, as do its reproductive effect, its size at maturity and prevalence of parasites”, the Catalan researcher adds.

The research team sampled a total of 929 gambusias in the summer of 2004 in the mouths (final 1,500 meters) of eight Mediterranean rivers from the south of France to Murcia.

The invasive path of gambusia

Aside from their overall effects on the trophic chain, gambusias and their most closely related species Gambusia affinis have caused the decline of many native fish and amphibian species worldwide.

Although this ecological impact has been “well documented” in the United States and Australia, other studies in Spain have used observational and experimental data to show that Gambusia holbrooki “competes with and displaces cyprinodontiform fish (small fish that live in fresh or brackish water), such as the Spanish toothcarp (Aphanius iberus) and the Valencia toothcarp (Valencia hispanica), both of which are endemic to the Peninsula and have seen their distribution area greatly reduced, now being considered to be in danger of extinction”, explains García-Berthou.

The gambusia is currently one of the most widely distributed continental fish species, and has been introduced into more than 50 countries over every continent except Antarctica.

The species, which prefers warm waters, is abundant throughout all the countries in the Mediterranean basin, but has yet to become established in countries such as the United Kingdom, Germany or the Nordic countries. “Its distribution is clearly limited by temperature”, says the scientist.

Spain was the first European country in which Gambusia holbrooki was introduced, in 1921.

References: Lluís Benejam; Carles Alcaraz; Pierre Sasal; Gael Simon-Levert; Emili García-Berthou. “Life history and parasites of the invasive mosquitofish (Gambusia holbrooki) along a latitudinal gradient” Biological Invasions (2009) 11:2265.

Image Caption: Climate change will speed the spread of invasive fish to northern Europe. Credit: Carles Alcaraz

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Lip-Biting Insect Carries Lethal Disease

It makes your skin crawl””a bug that crawls onto your lips while you sleep, drawn by the exhaled carbon dioxide, numbs your skin, bites, then gorges on your blood. And if that’s not insult enough, it promptly defecates on the wound-and passes on a potentially deadly disease.

Now Jean-Paul Paluzzi, a PhD candidate in biology at the University of Toronto Mississauga, believes that manipulating physiology to prevent the insects from leaving their messy calling card represents the best hope for stopping the transmission of the illness, known as Chagas’ disease.

“This is a disease of the poor,” says Paluzzi, who has visited parts of the world affected by the illness. “The bugs are found in makeshift homes with mud walls and palm tree-like ceilings. Unfortunately, the people of Central and South America that this affects don’t have sufficient voice to get help. Given that there are roughly 15 to 19 million people that are infected-a substantial proportion of that area’s population-it’s a disease that’s been neglected.”

Chagas’ disease is one of the major health problems in South and Central America and is spread by reduvid bugs, also known as “kissing bugs” because of their fondness for lips. The disease they transmit is caused by Trypanosoma cruzi, a parasite that lives in their gut. In the initial acute stage, symptoms are relatively mild, but as the disease progresses over several years, serious chronic symptoms can appear, such as heart disease and malformation of the intestines. Without treatment, it can be fatal. Currently, insecticide sprays are used to control insect populations, and anti-parasitic drugs are somewhat successful at treating acute infections. Once the disease is chronic, it cannot be cured.

To make matters worse, kissing bugs are particularly “bloodthirsty”. In mosquitoes, which go through four distinct stages of development, only adult females feed on blood (and potentially transmit disease). This means that pest control methods need to target only one out of eight stages (when you include both sexes). But in kissing bugs, each sex feeds on blood through all five stages of development. “So you have about a ten-fold greater chance of infection just because of the number of times that these insects have to feed,” says Paluzzi.

His research focuses on insect diuresis-more specifically, the genes and peptides that control how the kissing bug eliminates excess fluid in its gut after it gorges on blood. For the insect, the real prize in its meal is the red blood cells, while the water and salt is “excess baggage”. After they feed, the bugs are bloated and sluggish, and must jettison the waste so they can make their escape.

Here’s how it happens: when the kissing bug finds a snoozing victim and feeds, its levels of serotonin and diuretic hormones rise sharply, targeting the insect’s midgut and Malpighian tubules (the equivalent of kidneys), and triggering the release of waste. About four hours later, a peptide named CAP2b is released in the insect’s gut, abolishing the effect of the diuretic hormones.

Paluzzi has identified two genes (RhoprCAPA-alpha and RhoprCAPA-beta) that carry the chemical recipe for the peptides that stop diuresis. With that information, he hopes to create a peptide “agonist”-something that would enhance the activity of the CAP2B peptide and prevent the insect from leaving waste (and the parasite) on the wound. In theory, says Paluzzi, this might be an insecticide-like room spray or topical lotion that is biologically stable and has no effect on humans or other insects. Paluzzi is collaborating with a structural biochemist at the U.S. Food and Drug Administration in Texas, with the ultimate goal of creating a pest control solution, but he cautions that a market-ready product is many years away.

The research was funded by the Natural Sciences and Engineering Research Council of Canada, through a discovery grant to Professor Ian Orchard of the Department of Biology and a Canada Graduate Scholarship to Paluzzi.

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Medicine And Math Tackle Killer Diseases

Medicine and mathematics are being combined to develop powerful new scientific weapons to combat killer diseases.

This year’s ‘Science at the Shine Dome’ Symposium brings together some of the finest minds from Australia and around the world to explore how medicine and mathematics are working together to throw new light on the complex genetics that underlie diseases such as cancer.

The Symposium, entitled Genomics and Mathematics, will be held at the Australian Academy of Science’s Shine Dome, on 7 May 2010. Media are welcome to attend and interview participants.

‘In a number of diseases ““ cancer, for example ““ we’re beginning to discover that some of the genes that many of us carry make us more susceptible and to see possible treatments based on our knowledge of the genetic changes that appear to be major causal factors. But we’ve only scratched the surface of these kinds of analyses,’ explains symposium organizer Professor Peter Hall.

‘The real challenge is to discover which genetic features are linked to which disease, and how. In this process of discovery, mathematics and statistics are working hand in hand with medicine and biology, allowing scientists to quantify not just the existence of connections between genes and disease, but also the strength of these associations.’

‘Applying exciting new mathematical and statistical tools in medicine enables us to explore the genetic basis of disease far more than we could using more conventional methods. This reveals patterns that would not otherwise be detectable. And these in turn can potentially lead to better approaches to diagnosis and treatment.’

Highlights of the symposium include:
“¢ Professor Terry Speed, of the Walter and Eliza hall Institute will talk about the spectacular growth in genome data in the last two years and its implications for understanding and treating all kinds of disease.

“¢ Professor Simon Tavar© of the Department of Oncology, University of Cambridge, UK, will speak about ‘Combining genomics and mathematics to learn about cancer’.

“¢ Professor Susan Clark of the Garvan Institute of Medical Research will speak about ‘Epigenetics & Genetics: Discovery of layers of change in the cancer genome’.

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Mexico City Pollution Affects Young Hearts

Particulate matter carries “Ëœendotoxins,’ worsening the adverse reaction

A post-mortem study of the hearts of 21 young people in Mexico City has found that the heart begins to show the adverse effects of air pollution at a young age and that tiny bits of inactivated bacteria that hitch a ride on pollutants may make the problem worse.

The study is part of a growing body of research showing that air pollution can damage the heart and lead to increased risk of heart disease and heart attacks. But this study contrasted two different areas of the same city, showing that different types of pollutants can produce different effects.

Rodolfo Villarreal, Juan Palacios, Keith Parker and Lilian Calderon carried out the study, “Gene inflammatory expression profiling in right versus left ventricles in young urbanites: What is the long-term impact of myocardial inflammation in the setting of air pollution?” They presented their findings in a poster session on Wednesday, April 28 at the Experimental Biology 2010 conference which took place April 24-28 in Anaheim, Calif. The researchers are from the University of Montana (Palacios, Parker, Calderon), the Instituto Nacional de Pediatria in Mexico City (Calderon) and the Big Sky High School in Missoula, Montana (Villarreal). The American Society for Investigative Pathology is sponsoring the poster presentation.

Particulate matter more dangerous

The researchers examined the hearts of 21 young adults, average age 18, who had lived in Mexico City before dying in accidents. Mexico City has some of the worst air pollution in North America and has high concentrations of microscopic pollutants, known as particle pollution, or particulate matter. Particulate matter that is less than 2.5 micrometers wide ““ the kind of particle pollutants that are found in smoke and haze ““ are more likely to gain entrance to the body than larger particles, which can be filtered out in the nose. Once inside, the particles can travel to various parts of the body, including to the heart, where they can cause damage or disease.

Endotoxins are bits of dead bacteria that can gain entrance to the body by attaching to particulate matter. The bacteria are from a variety of sources, including feces and soil. The bacterial bits that hitchhike on particulate matter are remnants of the bacterial cell wall and are composed of lipopolysaccharides.

The body reacts to the particulate matter and endotoxins by mounting an inflammatory response, which is the body’s attempt to remove foreign invaders. Because the pollution is chronic, this can lead to chronic inflammation in the affected organs, such as the heart.

Air monitoring in metropolitan Mexico City has shown that pollution characteristics differ between north Mexico City and south Mexico City. Residents in the south side are exposed to higher levels of endotoxins than residents of north Mexico City. The research team’s previous research found that mice exposed to air from south Mexico City had higher levels of inflammation in the heart muscle than mice exposed to north Mexico City air. They hypothesized that the difference could be linked to the difference in endotoxin levels.

Does air pollution inflame the human heart?

The researchers wanted to see if the residents of north and south Mexico City were also affected differently, as the mice had been. They studied heart samples of young people who had died in accidents – six from south Mexico City and 15 from north Mexico City. Their average age at the time of death was 18 years, with most falling in the range of 13 to 23 years.

The study found that residents of both north and south Mexico City showed signs of inflammation in the heart. But residents in the south had a stronger inflammatory response, as shown by elevated levels of:

* IL-1ÃŽ²

* TNF-ÃŽ±

* CD14

IL-1ÃŽ² and TNF-ÃŽ± have been implicated in heart disease and sepsis and are believed to play a role in the death of heart muscle cells.

The study also found differences in how the left and right ventricles responded to the pollution for both groups. But south Mexico City residents had higher levels of TNF-ÃŽ± for both the right and left ventricles compared to northern subjects. In addition, IL-1ÃŽ² and CD14 targeted the right ventricle significantly more in the southern subjects.

The south residents also had significantly more IL-10 in both ventricles compared to the north residents. This makes sense, because the body uses IL-10 to slow down the inflammatory response once it has started and the inflammatory response was more intense in those from the south.

New understanding of air pollution and heart

The researchers concluded that:

* polluted air can create inflammation, even in the hearts of young individuals

* the right ventricle responds differently than the left

* endotoxins play a role in the inflammation

It is not clear why the right and left ventricles are affected differently, but it may be related to the difference between the ventricles. Cardiac chambers differ in their functions and consequently exhibit differences in their form. For example, the left ventricle, having to pump oxygenated blood to the body, has more tiny blood vessels, called capillaries. The right ventricle pumps deoxygenated blood to the lungs and does not have to pump as vigorously in comparison to its counterpart. These differences might contribute to the sharp differences in inflammation between ventricles in these highly exposed people.

The researchers note that this inflammation to the heart does not appear to create any immediate harm.

“However, as people age, this chronic inflammation may become a factor in heart disease,” said Villarreal. “The bottom line is, the air we breathe affects our heart health. The more research is conducted in this field, the more it is becoming clear we need to address the issue of air quality and its intricate ties to our health.”

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